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MG592647.1AUS00794.1NVP1278O_59__00059

Bact-Vir

MG592647.1__AUS00794.1__NVP1278O_59__00059

Identity

Accession:: MG592647 ↗
Kingdom:: phage

Quality

63.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.278.O._10N.286.54.E8

TaxID: 1881278

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 663-721

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vw4F01	3.90.930.12	Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6	0.58	39.0	3.48e-01	81.4%	45.2%
1tr8A01	2.20.70.30	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain	0.57	38.0	4.02e-01	74.6%	80.8%
1xteA00	3.30.1520.10	Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain	0.56	37.0	3.12e-01	81.4%	35.3%
3ptaA04	2.30.30.490	Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain	0.56	45.0	3.29e-01	93.2%	39.2%
2f68X01	2.60.40.1280	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	41.0	3.30e-01	84.7%	71.0%
1e88A03	2.10.70.10	Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1	0.55	35.0	3.88e-01	91.5%	92.9%
3abiA02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.55	44.0	3.26e-01	100.0%	31.6%
6fu4A01	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.54	41.0	3.13e-01	94.9%	31.9%
2crvA01	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.52	37.0	3.27e-01	78.0%	83.9%
2lt1A00	2.40.10.170	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.52	37.0	3.49e-01	100.0%	61.3%
2czoA00	3.30.1520.10	Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain	0.51	33.0	2.69e-01	79.7%	29.2%
1fx0B01	2.40.10.170	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.51	43.0	3.98e-01	98.3%	79.7%
2i4kA00	3.30.1520.10	Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain	0.51	35.0	2.89e-01	81.4%	35.2%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4933012	1.1.1.8 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas	0.64	47.0	3.75e-01	79.7%	65.8%
4887702	318.1.1.1 ↗	a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6	0.61	46.0	3.86e-01	81.4%	65.7%
5031162	1.1.1.0 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease	0.61	45.0	3.65e-01	79.7%	67.8%
3784643	318.1.1.0 ↗	a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6	0.61	43.0	3.67e-01	79.7%	43.7%
4436288	1.1.1.0 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease	0.60	41.0	3.41e-01	78.0%	38.2%
5049040	1.1.1.0 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease	0.58	42.0	3.50e-01	79.7%	68.5%
4951060	3124.1.1.1 ↗	beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC	0.56	40.0	3.96e-01	83.1%	70.8%
5030410	2.1.1.15 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon	0.55	37.0	3.30e-01	79.7%	44.2%
3427964	1.1.1.17 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2	0.54	38.0	3.03e-01	78.0%	34.8%
3935794	1.1.1.6 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease	0.53	37.0	2.88e-01	76.3%	32.4%
4169805	1.1.1.0 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease	0.52	36.0	3.04e-01	79.7%	40.0%
3427966	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.51	34.0	3.39e-01	78.0%	66.7%