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MG592653.1__AUS01327.1__NVP1283C_85__00085
Bact-VirMG592653.1__AUS01327.1__NVP1283C_85__00085
Identity
- Accession:
- MG592653 ↗
- Kingdom:
- phage
Quality
50.3
mean pLDDT
Taxonomy
TaxID: 1881374
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 165-282
Domain cluster:
rep: MG592420.1__AUR83526.1__NVP1036O_28__00028__D146-238
D2
medium
residues 443-511
Domain cluster:
rep: OQ729741.1__WJJ57727.1__BigMira_52__00052__D31-88
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.62 | 54.0 | 4.03e-01 | 97.1% | 51.1% |
| 2f9iD00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.61 | 54.0 | 3.66e-01 | 98.6% | 45.9% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 41.0 | 3.32e-01 | 82.6% | 38.4% |
| 5zeeB00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.57 | 46.0 | 3.10e-01 | 91.3% | 36.4% |
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.57 | 45.0 | 3.00e-01 | 89.9% | 30.2% |
| 1ojxE00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.19e-01 | 92.8% | 30.6% |
| 1tqxA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 46.0 | 3.28e-01 | 92.8% | 29.4% |
| 2b7oA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 45.0 | 2.92e-01 | 91.3% | 36.2% |
| 3fokA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.11e-01 | 95.7% | 28.5% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 44.0 | 3.36e-01 | 92.8% | 70.2% |
| 4ga6A02 | 1.20.970.50 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › | 0.55 | 40.0 | 3.11e-01 | 84.1% | 35.5% |
| 7jpjB01 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.54 | 40.0 | 2.83e-01 | 82.6% | 28.0% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 40.0 | 2.96e-01 | 98.6% | 28.3% |
| 7wj9A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 43.0 | 2.85e-01 | 94.2% | 19.9% |
| 2kjqA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 3.46e-01 | 94.2% | 46.8% |
| 4rweA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 3.20e-01 | 97.1% | 36.5% |
| 3ianA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 44.0 | 2.90e-01 | 94.2% | 22.9% |
| 2xryA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 39.0 | 3.15e-01 | 81.2% | 40.5% |
| 3a04A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 45.0 | 3.08e-01 | 94.2% | 34.7% |
| 3vnxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 42.0 | 3.07e-01 | 87.0% | 70.3% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.53 | 44.0 | 2.78e-01 | 98.6% | 51.3% |
| 1ii7A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 43.0 | 2.97e-01 | 91.3% | 29.3% |
| 2otmA00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.52 | 46.0 | 3.61e-01 | 100.0% | 92.1% |
| 7s6eA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 42.0 | 3.47e-01 | 91.3% | 64.2% |
| 4g9pA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.52 | 45.0 | 2.98e-01 | 97.1% | 34.8% |
| 3i8oA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.52 | 38.0 | 3.23e-01 | 81.2% | 59.4% |
| 1eucA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.52 | 44.0 | 3.38e-01 | 98.6% | 61.2% |
| 1wx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 43.0 | 3.11e-01 | 94.2% | 32.2% |
| 1y44A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 43.0 | 2.95e-01 | 98.6% | 24.6% |
| 4wbxC01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 43.0 | 3.14e-01 | 92.8% | 35.1% |
| 1fnnA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 3.22e-01 | 94.2% | 50.6% |
| 4ntdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 39.0 | 3.44e-01 | 97.1% | 53.6% |
| 5dcaA09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.08e-01 | 94.2% | 33.8% |
| 3zxsA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 41.0 | 3.24e-01 | 91.3% | 73.8% |
| 4narA01 | 3.40.50.11440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain | 0.51 | 41.0 | 2.89e-01 | 94.2% | 27.3% |
| 2ghaB02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 40.0 | 3.10e-01 | 94.2% | 82.5% |
| 1i24A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.51 | 39.0 | 3.13e-01 | 85.5% | 45.8% |
| 1rzuB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 43.0 | 2.95e-01 | 100.0% | 36.8% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4004315 | 7515.1.1.5 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C | 0.59 | 49.0 | 2.95e-01 | 92.8% | 31.8% |
| 3717593 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.57 | 44.0 | 2.85e-01 | 82.6% | 35.1% |
| 3471167 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.57 | 46.0 | 3.18e-01 | 91.3% | 67.3% |
| 2391164 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.56 | 48.0 | 3.05e-01 | 100.0% | 26.1% |
| 3461776 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.55 | 46.0 | 3.27e-01 | 98.6% | 38.8% |
| 4222863 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.55 | 44.0 | 3.21e-01 | 91.3% | 73.3% |
| 3709264 | 2485.1.1.21 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TXD17-like_Trx | 0.55 | 38.0 | 3.08e-01 | 76.8% | 35.2% |
| 3391536 | 109.4.1.1393 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26715 | 0.55 | 47.0 | 2.94e-01 | 100.0% | 29.9% |
| 4981987 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.55 | 45.0 | 2.88e-01 | 91.3% | 86.1% |
| 4976275 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 41.0 | 2.85e-01 | 87.0% | 23.8% |
| 3199298 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.54 | 41.0 | 2.82e-01 | 84.1% | 41.2% |
| 5047773 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.53 | 37.0 | 2.41e-01 | 98.6% | 13.7% |
| 3297908 | 300.1.1.16 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 | 0.53 | 45.0 | 3.27e-01 | 100.0% | 40.0% |
| 4113346 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.53 | 44.0 | 3.16e-01 | 92.8% | 42.9% |
| 3783242 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.53 | 41.0 | 2.88e-01 | 84.1% | 44.3% |
| 4947548 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.53 | 43.0 | 2.94e-01 | 91.3% | 27.3% |
| 5045819 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.53 | 44.0 | 2.97e-01 | 98.6% | 34.4% |
| 4928460 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.52 | 42.0 | 3.23e-01 | 91.3% | 45.3% |
| 3968239 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.52 | 40.0 | 3.01e-01 | 87.0% | 94.9% |
| 3449427 | 2003.1.1.11 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3Beta_HSD | 0.52 | 45.0 | 3.07e-01 | 97.1% | 60.4% |
| 5035716 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.51 | 38.0 | 2.79e-01 | 78.3% | 94.1% |
| 5083525 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 42.0 | 2.78e-01 | 94.2% | 26.9% |
| 4299362 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 42.0 | 2.96e-01 | 95.7% | 27.1% |
| 5064407 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.96e-01 | 95.7% | 65.4% |
| 5065901 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.51 | 40.0 | 3.30e-01 | 91.3% | 60.7% |
| 3737572 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.51 | 40.0 | 2.95e-01 | 91.3% | 73.0% |
| 3594526 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.51 | 42.0 | 2.92e-01 | 95.7% | 28.9% |
| 3700439 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.50 | 41.0 | 3.05e-01 | 95.7% | 70.0% |
D3
medium
residues 579-856
D4
medium
residues 857-935