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MG592670.1__AUS02572.1__NVP2159B_41__00041
Bact-VirMG592670.1__AUS02572.1__NVP2159B_41__00041
Identity
- Accession:
- MG592670 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Taxonomy
TaxID: 1881396
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-118
Domain cluster:
rep: IMGVR_UViG_3300005298_000040-3300005298-Ga0071330_107091546__D3-94
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23746.2 best | Gp41_Mu | 102.5 | 2.00e-29 | 96.5% | 100.0% |
| PF10109.16 | Phage_TAC_7 | 37.9 | 2.00e-09 | 85.2% | 96.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y3mA02 | 3.30.1370.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 25.0 | 3.31e-01 | 90.4% | 83.9% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.53 | 29.0 | 2.88e-01 | 72.2% | 50.4% |
| 3jamK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 24.0 | 2.63e-01 | 87.0% | 52.1% |
| 8p5sA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 38.0 | 3.05e-01 | 80.0% | 68.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077628 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.73 | 52.0 | 5.97e-01 | 81.7% | 100.0% |
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.67 | 53.0 | 5.59e-01 | 84.3% | 100.0% |
| 4978492 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.56 | 33.0 | 2.75e-01 | 88.7% | 33.3% |
| 4003744 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.51 | 39.0 | 2.40e-01 | 83.5% | 52.1% |
| 4661422 | 101.1.2.777 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30263 | 0.51 | 36.0 | 2.67e-01 | 73.0% | 56.4% |
| 4973641 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.50 | 39.0 | 3.26e-01 | 82.6% | 80.0% |
| 4968841 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 35.0 | 2.59e-01 | 72.2% | 57.5% |