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MG592671.1__AUS02953.1__NVP2275O_372__00372
Bact-VirMG592671.1__AUS02953.1__NVP2275O_372__00372
Identity
- Accession:
- MG592671 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Taxonomy
TaxID: 1881285
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-60
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 48.0 | 4.29e-01 | 100.0% | 50.0% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 49.0 | 4.14e-01 | 100.0% | 43.3% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.64 | 55.0 | 4.03e-01 | 100.0% | 37.8% |
| 1mg7A01 | 3.30.70.1000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like | 0.64 | 53.0 | 3.88e-01 | 96.6% | 77.7% |
| 2yweA05 | 3.30.70.2570 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation factor 4, C-terminal domain | 0.62 | 52.0 | 4.96e-01 | 96.6% | 80.9% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 45.0 | 4.29e-01 | 96.6% | 69.3% |
| 5k2mA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 44.0 | 4.27e-01 | 96.6% | 72.5% |
| 2pvpA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 41.0 | 4.05e-01 | 94.9% | 70.3% |
| 2ebeA00 | 3.30.70.2290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF3208) | 0.58 | 44.0 | 3.71e-01 | 84.7% | 99.1% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 43.0 | 4.15e-01 | 96.6% | 70.6% |
| 5i47B02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.57 | 41.0 | 3.97e-01 | 100.0% | 68.7% |
| 1auvA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.57 | 40.0 | 3.99e-01 | 94.9% | 75.0% |
| 3g7dA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 42.0 | 3.38e-01 | 100.0% | 41.1% |
| 1a9xA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 40.0 | 3.87e-01 | 96.6% | 68.6% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.55 | 43.0 | 3.80e-01 | 98.3% | 57.6% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.54 | 45.0 | 3.53e-01 | 100.0% | 73.1% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 43.0 | 3.26e-01 | 96.6% | 49.7% |
| 1rlhA02 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.53 | 37.0 | 3.21e-01 | 76.3% | 66.3% |
| 3vpbA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 38.0 | 3.73e-01 | 98.3% | 71.0% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.52 | 43.0 | 3.95e-01 | 98.3% | 76.8% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.51 | 42.0 | 3.71e-01 | 100.0% | 76.0% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 39.0 | 3.11e-01 | 93.2% | 45.1% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.51 | 43.0 | 3.72e-01 | 98.3% | 94.8% |
| 5zctA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 35.0 | 3.44e-01 | 96.6% | 68.2% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.04e-01 | 96.6% | 98.6% |
| 3v7iA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 37.0 | 2.90e-01 | 83.1% | 93.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508713 | 382.1.1.25 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › YjeJ | 0.69 | 60.0 | 4.82e-01 | 100.0% | 55.8% |
| 3588392 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.64 | 53.0 | 4.54e-01 | 100.0% | 56.0% |
| 4170310 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.62 | 50.0 | 4.44e-01 | 100.0% | 62.2% |
| 4969538 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.60 | 45.0 | 3.38e-01 | 83.1% | 83.2% |
| 4975598 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.60 | 46.0 | 2.99e-01 | 86.4% | 40.0% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 47.0 | 4.85e-01 | 100.0% | 98.2% |
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.56 | 47.0 | 4.55e-01 | 98.3% | 100.0% |
| 4033537 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.56 | 47.0 | 3.21e-01 | 100.0% | 24.8% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.56 | 40.0 | 4.12e-01 | 98.3% | 81.8% |
| 4924545 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.56 | 43.0 | 3.35e-01 | 100.0% | 36.1% |
| 5028433 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.55 | 38.0 | 2.84e-01 | 100.0% | 24.3% |
| 3188465 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.54 | 45.0 | 3.62e-01 | 100.0% | 67.7% |
| 4565829 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.54 | 39.0 | 2.97e-01 | 84.7% | 48.3% |
| 4514593 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.53 | 42.0 | 3.14e-01 | 94.9% | 47.6% |
| 3856202 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 40.0 | 2.69e-01 | 89.8% | 70.5% |
| 3208411 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.53 | 43.0 | 3.02e-01 | 98.3% | 38.4% |
| 4332626 | 3532.1.1.0 ↗ | alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase | 0.53 | 43.0 | 2.54e-01 | 100.0% | 11.1% |
| 2579422 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.52 | 45.0 | 3.93e-01 | 100.0% | 62.8% |
| 3400205 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.52 | 43.0 | 3.30e-01 | 100.0% | 38.6% |
| 3739896 | 6.1.1.16 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › BTD | 0.51 | 43.0 | 3.09e-01 | 100.0% | 96.5% |
| 2896602 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.50 | 42.0 | 3.63e-01 | 100.0% | 77.0% |
| 3740347 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.50 | 42.0 | 3.15e-01 | 100.0% | 55.8% |
| 3251650 | 10.2.1.84 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Seipin | 0.50 | 42.0 | 3.22e-01 | 100.0% | 76.8% |