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MG592671.1__AUS02998.1__NVP2275O_417__00417
Bact-VirMG592671.1__AUS02998.1__NVP2275O_417__00417
Identity
- Accession:
- MG592671 ↗
- Kingdom:
- phage
Quality
65.2
mean pLDDT
Taxonomy
TaxID: 1881285
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-70
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kcqA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.67 | 46.0 | 3.55e-01 | 72.7% | 37.3% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 47.0 | 4.21e-01 | 74.2% | 87.1% |
| 2kksA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.66 | 46.0 | 3.63e-01 | 74.2% | 38.4% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.65 | 46.0 | 3.46e-01 | 74.2% | 77.3% |
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.63 | 45.0 | 3.30e-01 | 74.2% | 46.6% |
| 1wqwA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.63 | 55.0 | 4.03e-01 | 100.0% | 90.4% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.63 | 44.0 | 4.48e-01 | 74.2% | 97.0% |
| 1nrvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 47.0 | 4.16e-01 | 83.3% | 86.0% |
| 1s7jA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 42.0 | 3.36e-01 | 72.7% | 49.2% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 43.0 | 3.75e-01 | 74.2% | 76.8% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 52.0 | 4.45e-01 | 98.5% | 93.5% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 48.0 | 3.62e-01 | 98.5% | 95.7% |
| 3ghgB02 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.57 | 48.0 | 3.33e-01 | 100.0% | 95.0% |
| 2as0A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.57 | 39.0 | 3.90e-01 | 72.7% | 94.3% |
| 3c0kA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.57 | 39.0 | 3.91e-01 | 74.2% | 94.4% |
| 1lwuC01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.56 | 47.0 | 3.75e-01 | 100.0% | 94.0% |
| 3m6wA03 | 2.30.130.60 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.55 | 39.0 | 3.96e-01 | 75.8% | 91.0% |
| 3hutA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 37.0 | 2.91e-01 | 71.2% | 32.7% |
| 2c9wA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 47.0 | 3.99e-01 | 100.0% | 79.6% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 3.17e-01 | 74.2% | 74.6% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 36.0 | 2.76e-01 | 74.2% | 30.0% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.52 | 36.0 | 3.32e-01 | 74.2% | 57.0% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.51 | 35.0 | 2.63e-01 | 74.2% | 37.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581318 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.88 | 62.0 | 6.34e-01 | 74.2% | 95.4% |
| 2512672 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.88 | 60.0 | 6.03e-01 | 71.2% | 100.0% |
| 2491358 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.85 | 63.0 | 3.69e-01 | 77.3% | 15.7% |
| 4859120 | 3856.1.2.0 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain | 0.85 | 61.0 | 5.31e-01 | 75.8% | 70.4% |
| 2485645 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.83 | 58.0 | 5.20e-01 | 72.7% | 76.1% |
| 2409669 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 59.0 | 3.62e-01 | 77.3% | 17.6% |
| 2491347 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.81 | 55.0 | 5.01e-01 | 71.2% | 78.4% |
| 3164979 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.79 | 59.0 | 5.28e-01 | 78.8% | 76.7% |
| 4979796 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.67 | 47.0 | 3.29e-01 | 74.2% | 74.4% |
| None | — | 0.66 | 47.0 | 3.29e-01 | 74.2% | 25.7% | |
| 4303964 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 49.0 | 4.87e-01 | 80.3% | 91.4% |
| 3414351 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 53.0 | 3.94e-01 | 92.4% | 69.1% |
| 3622767 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.64 | 46.0 | 4.17e-01 | 78.8% | 75.8% |
| 3965428 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 44.0 | 3.81e-01 | 72.7% | 79.0% |
| 4013364 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 45.0 | 4.09e-01 | 75.8% | 88.9% |
| 7027 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.63 | 55.0 | 4.03e-01 | 100.0% | 89.9% |
| 3268569 | 1.1.9.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 | 0.63 | 44.0 | 3.94e-01 | 74.2% | 93.7% |
| 3926830 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.63 | 52.0 | 4.51e-01 | 97.0% | 97.3% |
| 3617276 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 48.0 | 4.00e-01 | 84.8% | 72.5% |
| 3513931 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.62 | 47.0 | 4.09e-01 | 84.8% | 84.5% |
| 3888709 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.61 | 43.0 | 3.45e-01 | 74.2% | 72.6% |
| 4943282 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 45.0 | 3.30e-01 | 78.8% | 98.3% |
| 3280114 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.61 | 43.0 | 3.46e-01 | 74.2% | 41.5% |
| 5038074 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.60 | 50.0 | 3.58e-01 | 98.5% | 77.6% |
| 3204458 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.60 | 44.0 | 3.92e-01 | 78.8% | 91.6% |
| 4986631 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.59 | 45.0 | 3.39e-01 | 83.3% | 36.5% |
| 4965614 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 43.0 | 4.22e-01 | 77.3% | 88.6% |
| 3511994 | 1.1.9.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 | 0.58 | 41.0 | 3.81e-01 | 74.2% | 92.9% |
| 4267207 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.58 | 44.0 | 3.27e-01 | 83.3% | 32.1% |
| 2083983 | 269.1.1.2 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C,Fib_alpha | 0.58 | 48.0 | 3.25e-01 | 100.0% | 79.2% |
| 187 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.58 | 40.0 | 3.93e-01 | 72.7% | 91.7% |
| 4576540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.58 | 41.0 | 4.24e-01 | 74.2% | 91.7% |
| 4156478 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.58 | 41.0 | 3.46e-01 | 74.2% | 72.2% |
| 1772519 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.56 | 46.0 | 3.28e-01 | 100.0% | 94.8% |
| 3212241 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 47.0 | 4.00e-01 | 100.0% | 56.7% |
| 3480390 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 39.0 | 3.57e-01 | 72.7% | 92.2% |
| 3400395 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 47.0 | 4.03e-01 | 98.5% | 84.3% |
| 3219023 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.56 | 48.0 | 4.25e-01 | 100.0% | 67.0% |
| 4966648 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 40.0 | 3.16e-01 | 77.3% | 85.5% |
| 3615048 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.54 | 38.0 | 3.80e-01 | 74.2% | 94.3% |
| 2410306 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.54 | 39.0 | 2.94e-01 | 78.8% | 73.4% |
D2
high
residues 523-603
D3
medium
residues 78-490