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MG593801.1__AUG87151.1__SEA_ATTOOMI_19__00019
Bact-VirMG593801.1__AUG87151.1__SEA_ATTOOMI_19__00019
Identity
- Accession:
- MG593801 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 2059881
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-82
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 56.0 | 3.45e-01 | 100.0% | 13.8% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.70 | 50.0 | 3.70e-01 | 88.9% | 29.5% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.67 | 55.0 | 3.61e-01 | 100.0% | 24.9% |
| 2gu1A02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 54.0 | 3.97e-01 | 100.0% | 42.3% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 49.0 | 4.06e-01 | 100.0% | 48.5% |
| 2mm0A00 | 2.10.70.110 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.61 | 42.0 | 3.65e-01 | 75.0% | 75.0% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.60 | 45.0 | 3.28e-01 | 86.1% | 58.7% |
| 3nznA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 48.0 | 3.61e-01 | 97.2% | 78.6% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 49.0 | 3.42e-01 | 97.2% | 67.7% |
| 6jyxA01 | 2.10.270.20 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › | 0.58 | 40.0 | 2.88e-01 | 75.0% | 33.9% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.58 | 45.0 | 3.71e-01 | 91.7% | 48.4% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 39.0 | 3.32e-01 | 72.2% | 40.3% |
| 3vskA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.57 | 46.0 | 3.23e-01 | 100.0% | 83.5% |
| 2v05A02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.57 | 42.0 | 2.79e-01 | 83.3% | 40.2% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 43.0 | 2.66e-01 | 100.0% | 40.1% |
| 2m1cA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 2.86e-01 | 77.8% | 24.8% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.54 | 45.0 | 3.21e-01 | 100.0% | 47.5% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.54 | 40.0 | 2.57e-01 | 100.0% | 20.0% |
| 1xi7A00 | 4.10.40.20 | Few Secondary Structures › Irregular › Omega-AgatoxinV › | 0.53 | 36.0 | 3.54e-01 | 83.3% | 100.0% |
| 1mo9A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 37.0 | 2.63e-01 | 88.9% | 21.5% |
| 2vhjA02 | 2.30.270.20 | Mainly Beta › Roll › duf1285 protein fold › | 0.52 | 39.0 | 3.38e-01 | 86.1% | 71.0% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 2.76e-01 | 100.0% | 67.2% |
| 7v1nA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.51 | 37.0 | 2.76e-01 | 83.3% | 54.9% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 38.0 | 2.80e-01 | 86.1% | 29.8% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.51 | 35.0 | 3.06e-01 | 86.1% | 41.4% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.51 | 38.0 | 3.78e-01 | 100.0% | 89.7% |
| 3payB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 2.88e-01 | 100.0% | 50.0% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.51 | 40.0 | 3.15e-01 | 97.2% | 43.8% |
| 3oggA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 38.0 | 2.56e-01 | 97.2% | 59.2% |
| 3gkeA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 37.0 | 2.72e-01 | 94.4% | 25.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3767876 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.76 | 53.0 | 3.50e-01 | 94.4% | 18.6% |
| 3707311 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.72 | 60.0 | 3.66e-01 | 100.0% | 14.9% |
| 3896490 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.70 | 58.0 | 3.60e-01 | 100.0% | 16.8% |
| 5001324 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 51.0 | 3.71e-01 | 100.0% | 28.6% |
| 4311063 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.67 | 55.0 | 3.59e-01 | 100.0% | 24.4% |
| 3247905 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.66 | 55.0 | 3.42e-01 | 100.0% | 32.4% |
| 3945792 | 3953.1.1.2 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N2 | 0.66 | 55.0 | 4.06e-01 | 100.0% | 41.0% |
| 1833953 | 3702.1.1.2 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer_2 | 0.66 | 47.0 | 4.15e-01 | 94.4% | 49.2% |
| 4273033 | 3894.1.1.2 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD | 0.65 | 53.0 | 3.75e-01 | 100.0% | 30.4% |
| 5065208 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 50.0 | 4.45e-01 | 88.9% | 60.0% |
| 5046198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 4.30e-01 | 88.9% | 61.8% |
| 4681650 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.63 | 53.0 | 3.43e-01 | 100.0% | 25.7% |
| 3231010 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 51.0 | 3.48e-01 | 100.0% | 24.5% |
| 5049640 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 43.0 | 3.43e-01 | 72.2% | 31.6% |
| 4968925 | 375.1.1.356 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF29210 | 0.62 | 42.0 | 4.18e-01 | 88.9% | 65.0% |
| 4499276 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.61 | 51.0 | 3.95e-01 | 94.4% | 55.0% |
| 4465258 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.61 | 52.0 | 3.72e-01 | 94.4% | 44.0% |
| 1140900 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.60 | 48.0 | 4.20e-01 | 94.4% | 61.0% |
| 3559319 | 101.1.11.134 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Sarcoglycan_1 | 0.60 | 51.0 | 4.35e-01 | 97.2% | 73.3% |
| 5041230 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.59 | 45.0 | 4.10e-01 | 91.7% | 62.0% |
| 5019949 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.59 | 46.0 | 3.58e-01 | 100.0% | 36.8% |
| 4505171 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.59 | 42.0 | 2.48e-01 | 77.8% | 12.4% |
| 5011464 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.59 | 45.0 | 3.69e-01 | 100.0% | 45.9% |
| 3221377 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.59 | 48.0 | 3.50e-01 | 100.0% | 40.9% |
| 3505711 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.59 | 44.0 | 3.41e-01 | 100.0% | 35.3% |
| 3411216 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.58 | 48.0 | 3.55e-01 | 97.2% | 44.0% |
| 4802915 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.58 | 41.0 | 3.31e-01 | 75.0% | 54.1% |
| 4548669 | 244.2.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rbx_binding | 0.57 | 47.0 | 3.73e-01 | 94.4% | 46.7% |
| 4616362 | 3702.1.1.1 ↗ | beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer | 0.57 | 45.0 | 3.19e-01 | 97.2% | 27.5% |
| 3804264 | 64.1.1.8 ↗ | beta meanders › WW domain-like › WW domain › WW domain › DUF7028 | 0.56 | 45.0 | 3.52e-01 | 94.4% | 84.7% |
| 3976197 | 241.13.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif | 0.56 | 46.0 | 3.31e-01 | 97.2% | 33.0% |
| 4312419 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.56 | 44.0 | 2.78e-01 | 100.0% | 26.1% |
| 3470536 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.55 | 44.0 | 3.10e-01 | 100.0% | 27.4% |
| 3277484 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.55 | 39.0 | 3.62e-01 | 94.4% | 58.0% |
| 3612090 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.47e-01 | 100.0% | 51.7% |
| 4988955 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.53 | 45.0 | 3.89e-01 | 100.0% | 66.7% |
| 3480220 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.53 | 37.0 | 3.75e-01 | 75.0% | 100.0% |
| 5052221 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.53 | 40.0 | 2.39e-01 | 97.2% | 23.4% |
| 2971233 | 4056.1.1.2 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_connector | 0.52 | 39.0 | 3.41e-01 | 100.0% | 59.7% |
| 3966923 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.51 | 35.0 | 2.63e-01 | 77.8% | 24.0% |
| 3228744 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.51 | 38.0 | 3.51e-01 | 100.0% | 70.0% |
| 3513422 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.51 | 38.0 | 3.35e-01 | 100.0% | 50.0% |
| 3997049 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 40.0 | 3.86e-01 | 100.0% | 84.4% |
| 3791417 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.51 | 37.0 | 3.66e-01 | 100.0% | 80.0% |
| 4024527 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.50 | 39.0 | 2.33e-01 | 100.0% | 41.9% |
| 3925697 | 109.2.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_47 | 0.50 | 37.0 | 2.13e-01 | 86.1% | 15.5% |
| 3322575 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.50 | 34.0 | 2.16e-01 | 77.8% | 21.5% |