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MG593801.1__AUG87171.1__SEA_ATTOOMI_39__00039

Bact-Vir

MG593801.1__AUG87171.1__SEA_ATTOOMI_39__00039

Identity

Accession:
MG593801 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-65
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.86 75.0 5.81e-01 100.0% 45.8%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.78 68.0 5.33e-01 100.0% 46.7%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.73 41.0 3.60e-01 81.0% 39.5%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.71 51.0 3.74e-01 74.1% 77.0%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 53.0 4.54e-01 82.8% 53.8%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.68 52.0 3.93e-01 82.8% 62.0%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 48.0 3.86e-01 74.1% 44.0%
8onuA01 2.60.450.10 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain 0.68 47.0 3.76e-01 72.4% 46.4%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.68 59.0 4.35e-01 98.3% 45.5%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 52.0 4.26e-01 84.5% 72.5%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.67 55.0 4.83e-01 89.7% 87.1%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 45.0 3.85e-01 98.3% 42.7%
1lqvB00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.66 49.0 3.56e-01 81.0% 82.7%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.66 50.0 3.62e-01 84.5% 51.1%
4q28A00 3.30.160.780 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 53.0 4.28e-01 87.9% 92.7%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.66 50.0 4.73e-01 84.5% 70.4%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 45.0 3.34e-01 96.6% 28.0%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.65 50.0 3.56e-01 84.5% 30.1%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 51.0 3.98e-01 89.7% 40.6%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.64 45.0 3.35e-01 74.1% 66.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 46.0 3.73e-01 77.6% 48.3%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.64 50.0 4.52e-01 87.9% 85.4%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 49.0 4.49e-01 84.5% 86.8%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 50.0 3.23e-01 91.4% 88.8%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 43.0 3.62e-01 93.1% 42.0%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 51.0 3.33e-01 93.1% 44.1%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 47.0 3.00e-01 82.8% 26.1%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 47.0 4.31e-01 82.8% 86.8%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 52.0 4.13e-01 96.6% 55.7%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 47.0 3.00e-01 89.7% 88.6%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 3.70e-01 87.9% 41.9%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.60 43.0 3.58e-01 77.6% 49.5%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 43.0 2.85e-01 81.0% 31.0%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 46.0 3.57e-01 84.5% 40.0%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.59 49.0 4.50e-01 94.8% 80.5%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 43.0 4.02e-01 79.3% 87.8%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.58 49.0 3.06e-01 100.0% 36.4%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.75e-01 93.1% 37.1%
3bs1A00 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.57 37.0 3.20e-01 74.1% 38.8%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 49.0 3.24e-01 98.3% 83.6%
1eazA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.59e-01 84.5% 53.4%
2p6rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 2.87e-01 81.0% 87.8%
2f68X01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 2.95e-01 74.1% 49.3%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 43.0 3.67e-01 91.4% 68.3%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.55 43.0 3.51e-01 94.8% 89.0%
2o30A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.29e-01 70.7% 78.0%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.72e-01 96.6% 59.2%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 3.96e-01 82.8% 83.3%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.77e-01 98.3% 64.6%
1k0eB00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.52 43.0 2.64e-01 93.1% 16.2%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 45.0 3.77e-01 94.8% 63.3%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 40.0 3.05e-01 96.6% 65.2%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 3.91e-01 86.2% 93.2%
2aj2A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.51 42.0 3.67e-01 98.3% 87.6%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.51 37.0 3.08e-01 82.8% 80.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5006845 295.1.1.27 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.89 70.0 7.17e-01 82.8% 94.5%
5051418 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.78 69.0 5.20e-01 98.3% 68.9%
3576228 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.73 55.0 4.66e-01 79.3% 66.3%
3774282 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 56.0 4.13e-01 82.8% 38.0%
3252809 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 55.0 4.27e-01 82.8% 42.3%
3254426 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.70 52.0 3.95e-01 79.3% 39.3%
3805804 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.70 58.0 5.09e-01 89.7% 80.0%
4971601 241.14.1.0 a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C 0.70 57.0 5.40e-01 89.7% 74.3%
3211176 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.70 59.0 3.83e-01 100.0% 21.2%
3738698 213.1.1.6 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.70 56.0 4.41e-01 87.9% 84.2%
3533574 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 50.0 3.69e-01 100.0% 30.3%
3701349 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 57.0 3.35e-01 89.7% 36.4%
3468148 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.69 56.0 3.87e-01 89.7% 46.7%
3515736 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 3.87e-01 100.0% 24.7%
3452325 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.68 55.0 3.77e-01 89.7% 32.0%
3249804 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.68 55.0 3.82e-01 89.7% 29.7%
3946165 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.68 46.0 4.72e-01 70.7% 81.8%
3226237 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.67 60.0 3.91e-01 100.0% 22.7%
3707372 7039.1.1.0 a+b complex topology › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM 0.67 52.0 3.41e-01 86.2% 78.1%
3545477 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 48.0 3.63e-01 100.0% 32.1%
3294867 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.66 52.0 4.44e-01 86.2% 91.6%
3778852 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.66 49.0 3.67e-01 100.0% 32.9%
3434838 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.66 54.0 3.39e-01 91.4% 47.6%
3471318 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 56.0 4.69e-01 96.6% 63.0%
3228083 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 56.0 3.72e-01 100.0% 35.4%
3217555 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.65 56.0 3.70e-01 100.0% 22.7%
3475007 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 47.0 3.91e-01 79.3% 48.2%
3433410 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.64 55.0 3.51e-01 98.3% 38.0%
5040422 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 48.0 4.48e-01 82.8% 89.3%
3470550 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.63 48.0 3.04e-01 82.8% 82.0%
3650726 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 44.0 3.28e-01 74.1% 31.6%
7396 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.63 50.0 3.12e-01 91.4% 89.1%
1279538 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.63 51.0 3.33e-01 93.1% 44.1%
4952214 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 48.0 4.40e-01 82.8% 88.0%
4181736 4041.1.1.0 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.62 54.0 3.94e-01 100.0% 60.6%
5042313 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 47.0 4.38e-01 82.8% 85.3%
3273029 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.61 53.0 3.52e-01 98.3% 62.7%
3999577 4099.1.1.28 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.61 49.0 4.34e-01 89.7% 67.1%
5028466 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.61 47.0 3.77e-01 84.5% 95.0%
3244257 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 52.0 3.45e-01 98.3% 32.7%
1563689 3304.1.1.2 a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N 0.60 46.0 3.69e-01 87.9% 41.5%
4995140 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.60 44.0 3.31e-01 79.3% 91.7%
2429397 214.1.1.4 a+b two layers › SH2 › SH2 › SH2 › MelC1 0.60 47.0 4.26e-01 86.2% 77.5%
3530034 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 46.0 3.66e-01 84.5% 60.8%
3276218 220.1.1.30 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.59 45.0 3.60e-01 84.5% 82.4%
3770717 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.58 48.0 3.08e-01 100.0% 55.3%
3613171 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 50.0 3.50e-01 98.3% 53.2%
3620293 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 44.0 3.50e-01 86.2% 38.5%
3883832 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 49.0 3.60e-01 98.3% 36.3%
4009281 219.1.1.65 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.57 43.0 3.62e-01 84.5% 50.5%
3930462 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.56 44.0 3.45e-01 89.7% 40.7%
3590812 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 38.0 3.78e-01 75.9% 70.0%
3633728 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 45.0 3.68e-01 94.8% 55.7%
81576 880.1.1.1 a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind 0.55 44.0 2.89e-01 93.1% 24.4%
3271442 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 41.0 3.20e-01 86.2% 34.7%
3405299 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 47.0 3.21e-01 100.0% 31.6%
3476418 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.44e-01 96.6% 64.4%
3936699 5.1.4.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.53 46.0 2.79e-01 100.0% 18.6%
3262550 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 43.0 3.51e-01 96.6% 57.5%
3225762 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.53 39.0 3.67e-01 84.5% 82.7%
5001326 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.52 46.0 3.01e-01 96.6% 80.4%
3791186 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 37.0 3.42e-01 79.3% 57.5%
4978329 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.51 39.0 3.56e-01 86.2% 85.5%
4584882 5046.1.1.1 extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › ATP-synt_B 0.51 45.0 2.87e-01 94.8% 51.0%