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MG593801.1__AUG87173.1__SEA_ATTOOMI_41__00041
Bact-VirMG593801.1__AUG87173.1__SEA_ATTOOMI_41__00041
Identity
- Accession:
- MG593801 ↗
- Kingdom:
- phage
Quality
70.8
mean pLDDT
Taxonomy
TaxID: 2059881
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-88
Domain cluster:
rep: MH001457.1__AVO22306.1__PBI_NESBITT_49__00049__D80-142
CATH (2)
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3691998 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.59 | 36.0 | 4.10e-01 | 96.5% | 80.0% |
| 3251800 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.59 | 35.0 | 4.32e-01 | 96.5% | 94.5% |
| 3169156 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.57 | 33.0 | 4.24e-01 | 95.3% | 100.0% |
| 3605879 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.57 | 26.0 | 3.35e-01 | 87.1% | 75.6% |
| 3623529 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 28.0 | 3.50e-01 | 85.9% | 100.0% |
| 3279949 | 3708.1.1.1 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB | 0.53 | 35.0 | 3.60e-01 | 80.0% | 71.2% |
| 3715091 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.53 | 35.0 | 4.03e-01 | 98.8% | 90.8% |
| 3219013 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.52 | 43.0 | 3.88e-01 | 90.6% | 92.2% |
| 3183086 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 26.0 | 3.52e-01 | 96.5% | 95.6% |
| 3796896 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 24.0 | 2.96e-01 | 87.1% | 75.6% |
| 3875972 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.50 | 26.0 | 3.31e-01 | 74.1% | 100.0% |
D2
high
residues 106-170
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 57.0 | 4.72e-01 | 100.0% | 47.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.70 | 55.0 | 5.66e-01 | 100.0% | 88.9% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 4.65e-01 | 100.0% | 52.8% |
| 4epcA01 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 58.0 | 5.41e-01 | 100.0% | 81.5% |
| 2rsoA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 44.0 | 3.93e-01 | 73.8% | 50.0% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 49.0 | 4.94e-01 | 100.0% | 90.6% |
| 3l2pA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 43.0 | 3.49e-01 | 73.8% | 80.8% |
| 1hh2P02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 41.0 | 4.19e-01 | 72.3% | 98.4% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 50.0 | 3.79e-01 | 100.0% | 69.6% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.21e-01 | 100.0% | 78.1% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 46.0 | 4.06e-01 | 100.0% | 75.2% |
| 7xs0A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 42.0 | 3.93e-01 | 87.7% | 78.3% |
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 40.0 | 3.24e-01 | 84.6% | 74.1% |
| 7csoA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.55e-01 | 98.5% | 79.5% |
| 1wl8A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 38.0 | 2.91e-01 | 86.2% | 42.6% |
| 4ak1A02 | 2.30.30.1270 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 38.0 | 3.88e-01 | 89.2% | 84.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055039 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.73 | 59.0 | 4.63e-01 | 100.0% | 41.4% |
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.72 | 59.0 | 5.20e-01 | 100.0% | 61.1% |
| 3881192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 54.0 | 3.98e-01 | 100.0% | 31.8% |
| 4956433 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.70 | 51.0 | 4.40e-01 | 76.9% | 88.0% |
| 3591144 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.70 | 57.0 | 4.30e-01 | 98.5% | 38.0% |
| 3937478 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.69 | 57.0 | 4.72e-01 | 100.0% | 51.8% |
| 145843 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.69 | 55.0 | 4.65e-01 | 100.0% | 52.8% |
| 3504834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 5.11e-01 | 100.0% | 82.8% |
| 3177469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 55.0 | 5.40e-01 | 100.0% | 82.9% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.67 | 57.0 | 5.41e-01 | 100.0% | 78.7% |
| 3924375 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.67 | 53.0 | 5.05e-01 | 100.0% | 73.3% |
| 3434219 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.65 | 56.0 | 4.86e-01 | 100.0% | 63.2% |
| 3611443 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.65 | 58.0 | 4.75e-01 | 100.0% | 69.2% |
| 5045554 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.64 | 58.0 | 4.70e-01 | 100.0% | 71.4% |
| 3174427 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.64 | 55.0 | 4.13e-01 | 100.0% | 39.4% |
| 3817655 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.64 | 56.0 | 4.55e-01 | 100.0% | 57.6% |
| 3650798 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 58.0 | 4.74e-01 | 100.0% | 65.2% |
| 4295399 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.63 | 56.0 | 4.89e-01 | 100.0% | 77.0% |
| 3624306 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.62 | 56.0 | 4.46e-01 | 100.0% | 62.4% |
| 3208838 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.61 | 55.0 | 4.15e-01 | 100.0% | 52.9% |
| 3447437 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.60 | 53.0 | 4.16e-01 | 100.0% | 46.7% |
| 3422852 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.59 | 53.0 | 4.28e-01 | 100.0% | 71.2% |
| 3334322 | 4.25.1.1 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp | 0.59 | 53.0 | 5.02e-01 | 100.0% | 85.3% |
| 3585452 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.58 | 51.0 | 4.97e-01 | 100.0% | 90.0% |
| 4608468 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.56 | 47.0 | 3.20e-01 | 96.9% | 46.9% |
| 3829807 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.56 | 47.0 | 3.70e-01 | 100.0% | 44.4% |
| 3658595 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.55 | 41.0 | 4.09e-01 | 81.5% | 84.3% |
| 4015397 | 4.1.1.72 ↗ | beta barrels › SH3 › SH3 › SH3 › Hva1_TUDOR | 0.52 | 37.0 | 3.89e-01 | 78.5% | 90.0% |
| 4021196 | 270.1.1.0 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related | 0.51 | 39.0 | 3.24e-01 | 90.8% | 74.1% |
| 3931963 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 45.0 | 3.65e-01 | 100.0% | 72.0% |
| 3493244 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.50 | 41.0 | 2.70e-01 | 95.4% | 19.7% |
D3
medium
residues 173-237