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MG593802.1__AUG87237.1__SEA_OMAR_53__00052
Bact-VirMG593802.1__AUG87237.1__SEA_OMAR_53__00052
Identity
- Accession:
- MG593802 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Taxonomy
TaxID: 2059882
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-63
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.66 | 49.0 | 4.50e-01 | 83.7% | 65.0% |
| 2xdoD00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 47.0 | 2.81e-01 | 83.7% | 42.9% |
| 2x3nA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.62 | 53.0 | 3.68e-01 | 97.7% | 51.7% |
| 5zwlE01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.59 | 41.0 | 3.26e-01 | 72.1% | 86.4% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.57 | 43.0 | 3.26e-01 | 81.4% | 80.0% |
| 5ah5A01 | 3.10.20.590 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 41.0 | 3.61e-01 | 76.7% | 96.7% |
| 1eu3A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 42.0 | 3.08e-01 | 83.7% | 88.5% |
| 1wghA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 38.0 | 3.18e-01 | 76.7% | 96.4% |
| 4o1nD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 42.0 | 3.20e-01 | 90.7% | 85.2% |
| 1wh3A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 36.0 | 3.13e-01 | 72.1% | 97.2% |
| 3fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 39.0 | 2.49e-01 | 81.4% | 15.2% |
| 2bteA05 | 3.10.20.590 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 40.0 | 3.55e-01 | 81.4% | 96.8% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 38.0 | 2.48e-01 | 83.7% | 16.4% |
| 4ml9A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 39.0 | 2.55e-01 | 97.7% | 26.8% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 45.0 | 3.17e-01 | 100.0% | 53.9% |
| 2dyiA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.52 | 39.0 | 3.34e-01 | 81.4% | 91.5% |
| 3c4aA02 | 3.30.9.20 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.52 | 38.0 | 2.76e-01 | 83.7% | 47.3% |
| 3ds8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.39e-01 | 81.4% | 15.8% |
| 7pyvC02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 35.0 | 3.09e-01 | 76.7% | 100.0% |
| 3h8lA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 38.0 | 2.89e-01 | 100.0% | 69.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5011067 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.72 | 54.0 | 3.22e-01 | 81.4% | 39.3% |
| 3185506 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.72 | 51.0 | 3.56e-01 | 74.4% | 38.3% |
| 3587465 | 221.1.1.50 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4430 | 0.72 | 49.0 | 3.82e-01 | 72.1% | 95.6% |
| 3287557 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.67 | 50.0 | 2.92e-01 | 81.4% | 38.7% |
| 3309696 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.67 | 49.0 | 3.49e-01 | 100.0% | 25.2% |
| 4862411 | 4022.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in urocanase (Pfam 01175) › N-terminal a+b domain in urocanase (Pfam 01175) › N-terminal a+b domain in urocanase (Pfam 01175) › Urocanase_N | 0.66 | 41.0 | 2.90e-01 | 72.1% | 20.0% |
| 3970011 | 4022.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in urocanase (Pfam 01175) › N-terminal a+b domain in urocanase (Pfam 01175) › N-terminal a+b domain in urocanase (Pfam 01175) | 0.66 | 41.0 | 2.89e-01 | 72.1% | 20.0% |
| 3494854 | 221.3.1.5 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains › Zn_SUZ12 | 0.66 | 45.0 | 3.41e-01 | 72.1% | 68.0% |
| 63257 | 4022.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in urocanase (Pfam 01175) › N-terminal a+b domain in urocanase (Pfam 01175) › N-terminal a+b domain in urocanase (Pfam 01175) › Urocanase_N | 0.65 | 40.0 | 2.86e-01 | 72.1% | 20.1% |
| 3827210 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.64 | 47.0 | 3.29e-01 | 79.1% | 39.3% |
| 4935671 | 221.10.1.0 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain | 0.62 | 48.0 | 4.28e-01 | 83.7% | 98.3% |
| 3265492 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.62 | 45.0 | 3.87e-01 | 76.7% | 92.3% |
| 3279776 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.61 | 41.0 | 3.07e-01 | 72.1% | 41.8% |
| 3967756 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.60 | 46.0 | 3.90e-01 | 83.7% | 85.7% |
| 4026086 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 40.0 | 3.16e-01 | 72.1% | 100.0% |
| 4074418 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.58 | 41.0 | 3.71e-01 | 76.7% | 98.3% |
| 4261002 | 56.1.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N | 0.57 | 40.0 | 3.28e-01 | 76.7% | 91.8% |
| 5073669 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.57 | 39.0 | 2.81e-01 | 81.4% | 20.7% |
| 4489852 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.57 | 41.0 | 3.67e-01 | 76.7% | 98.3% |
| 4296285 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.56 | 41.0 | 3.65e-01 | 76.7% | 96.7% |
| 4032941 | 7579.1.1.30 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF915 | 0.56 | 42.0 | 2.70e-01 | 100.0% | 40.8% |
| 5025038 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 47.0 | 3.03e-01 | 100.0% | 34.0% |
| 5003291 | 2003.1.5.70 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_15 | 0.55 | 46.0 | 3.01e-01 | 100.0% | 39.5% |
| 4512311 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.54 | 47.0 | 3.45e-01 | 100.0% | 46.7% |
| 4058810 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.54 | 41.0 | 3.64e-01 | 83.7% | 93.8% |
| 4058844 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.54 | 41.0 | 3.60e-01 | 83.7% | 93.8% |
| 3387311 | 221.10.1.1 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ | 0.54 | 41.0 | 3.61e-01 | 83.7% | 89.2% |
| 4942517 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.54 | 38.0 | 2.89e-01 | 86.0% | 86.2% |
| 3168220 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 45.0 | 3.42e-01 | 100.0% | 40.0% |
| 4470334 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.53 | 41.0 | 3.57e-01 | 83.7% | 95.2% |
| 4177594 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.52 | 40.0 | 3.50e-01 | 83.7% | 92.3% |
| 4214688 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.51 | 40.0 | 3.56e-01 | 83.7% | 100.0% |
| 2600450 | 7579.1.1.30 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF915 | 0.51 | 38.0 | 2.39e-01 | 81.4% | 15.8% |
| 5024510 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.51 | 42.0 | 2.81e-01 | 100.0% | 80.5% |
| 4990658 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.51 | 42.0 | 2.87e-01 | 100.0% | 58.2% |
| 3371862 | 7577.1.1.12 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Alliinase_C | 0.51 | 38.0 | 2.60e-01 | 97.7% | 19.1% |
| 5046117 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.50 | 35.0 | 2.72e-01 | 88.4% | 86.2% |
| 5047754 | 221.10.1.0 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain | 0.50 | 42.0 | 3.37e-01 | 97.7% | 90.0% |