←Back to structures
MG593803.1__AUG87298.1__SEA_ROWA_34__00034
Bact-VirMG593803.1__AUG87298.1__SEA_ROWA_34__00034
Identity
- Accession:
- MG593803 ↗
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Taxonomy
TaxID: 2059883
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-53
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ethA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.65 | 47.0 | 4.43e-01 | 100.0% | 64.5% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 55.0 | 4.89e-01 | 100.0% | 73.7% |
| 2g1lA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.63 | 55.0 | 4.44e-01 | 100.0% | 100.0% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.62 | 49.0 | 4.72e-01 | 100.0% | 78.7% |
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 53.0 | 4.94e-01 | 100.0% | 80.6% |
| 2bb6A02 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.61 | 52.0 | 4.21e-01 | 100.0% | 84.0% |
| 3vteA03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.61 | 51.0 | 3.58e-01 | 100.0% | 45.4% |
| 2w82A01 | 3.10.20.480 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Antirestriction protein ArdA, domain 1 | 0.60 | 49.0 | 4.72e-01 | 100.0% | 81.4% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.58 | 39.0 | 3.14e-01 | 100.0% | 32.7% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.57 | 48.0 | 4.00e-01 | 100.0% | 70.0% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.57 | 46.0 | 3.36e-01 | 100.0% | 33.7% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 44.0 | 3.70e-01 | 100.0% | 48.9% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.56 | 47.0 | 3.69e-01 | 100.0% | 51.2% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.92e-01 | 98.1% | 66.2% |
| 2hpuA02 | 3.30.70.2050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 39.0 | 3.69e-01 | 96.2% | 61.9% |
| 4jguA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.45e-01 | 82.7% | 68.4% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 39.0 | 2.42e-01 | 80.8% | 68.3% |
| 1hnfA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.48e-01 | 82.7% | 73.4% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.53 | 45.0 | 3.90e-01 | 100.0% | 90.5% |
| 1swgC00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 39.0 | 3.14e-01 | 90.4% | 86.5% |
| 1j0hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.39e-01 | 100.0% | 84.0% |
| 1rlhA02 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.52 | 43.0 | 3.58e-01 | 100.0% | 99.0% |
| 5v7qZ00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.51 | 44.0 | 4.28e-01 | 100.0% | 96.6% |
| 5c86A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.41e-01 | 100.0% | 54.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4478617 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.68 | 42.0 | 3.10e-01 | 100.0% | 23.7% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 62.0 | 5.99e-01 | 100.0% | 96.6% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 62.0 | 5.88e-01 | 100.0% | 93.3% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 61.0 | 5.98e-01 | 100.0% | 98.2% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.67 | 60.0 | 5.31e-01 | 100.0% | 74.7% |
| 3501365 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.64 | 40.0 | 3.30e-01 | 86.5% | 33.7% |
| 184960 | 3489.1.1.1 ↗ | a+b complex topology › ArdA › ArdA › ArdA › ArdA | 0.60 | 47.0 | 3.43e-01 | 100.0% | 29.4% |
| 3858396 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.60 | 49.0 | 3.86e-01 | 100.0% | 68.8% |
| 3881059 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 3.86e-01 | 100.0% | 57.3% |
| 5045103 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.57 | 48.0 | 4.34e-01 | 100.0% | 96.0% |
| 3591380 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 47.0 | 3.04e-01 | 100.0% | 28.4% |
| 3923043 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.56 | 48.0 | 3.97e-01 | 100.0% | 72.0% |
| 4967335 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.56 | 45.0 | 4.01e-01 | 98.1% | 97.6% |
| 5017 | 4187.1.1.2 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL | 0.56 | 41.0 | 3.82e-01 | 100.0% | 62.1% |
| 4945733 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.55 | 45.0 | 2.98e-01 | 100.0% | 34.0% |
| 3728553 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 44.0 | 3.78e-01 | 98.1% | 77.9% |
| 5025087 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.54 | 47.0 | 4.50e-01 | 100.0% | 98.3% |
| 3593924 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.54 | 43.0 | 3.53e-01 | 100.0% | 51.7% |
| 3803482 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 43.0 | 4.04e-01 | 100.0% | 100.0% |
| 4978692 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.53 | 45.0 | 2.86e-01 | 100.0% | 44.9% |
| 4551221 | 11.1.1.46 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N | 0.53 | 45.0 | 3.48e-01 | 100.0% | 81.6% |
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.52 | 41.0 | 3.81e-01 | 100.0% | 66.7% |
| 5026064 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.52 | 42.0 | 3.49e-01 | 98.1% | 100.0% |
| 5008102 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.51 | 43.0 | 3.61e-01 | 100.0% | 98.0% |
| 3592726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.45e-01 | 100.0% | 57.4% |
| 3600586 | 11.1.1.606 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BBS2_GAE | 0.51 | 41.0 | 3.42e-01 | 100.0% | 47.3% |
| 4306719 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 41.0 | 3.91e-01 | 100.0% | 75.4% |
| 3339376 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 39.0 | 3.21e-01 | 94.2% | 73.9% |