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MG596799.1__AUM59634.1__X__00032

Bact-Vir

MG596799.1__AUM59634.1__X__00032

Identity

Accession:
MG596799 ↗
Kingdom:
phage

Quality

71.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Maxrubnervirus› Pseudomonas_phage_PMBT3

TaxID: 2059856

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 202-283
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA02 2.60.120.640 Mainly Beta › Sandwich › Jelly Rolls › gp9 0.78 71.0 6.57e-01 100.0% 86.4%
6o38A01 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.76 68.0 6.56e-01 100.0% 87.0%
6o38A03 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.75 62.0 6.21e-01 93.9% 88.0%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.73 67.0 6.09e-01 100.0% 77.1%
1id2A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.61 47.0 4.30e-01 84.1% 62.3%
6aieA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 48.0 3.80e-01 90.2% 45.6%
4f7kA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.60 46.0 4.21e-01 85.4% 67.5%
2wnkA01 2.60.40.1320 Mainly Beta › Sandwich › Immunoglobulin-like › SRS domain 0.59 42.0 3.77e-01 74.4% 93.2%
2i6gB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 43.0 3.35e-01 80.5% 81.9%
1g8aA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 42.0 3.34e-01 76.8% 85.2%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 46.0 3.65e-01 90.2% 47.1%
4f2eA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 47.0 4.48e-01 90.2% 76.5%
3bgvD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 42.0 3.03e-01 79.3% 88.4%
3l1aA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 48.0 3.51e-01 91.5% 58.8%
1bxvA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.57 45.0 4.40e-01 87.8% 79.1%
1shxA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.56 46.0 3.93e-01 90.2% 74.6%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.69e-01 92.7% 54.1%
2e6mA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 41.0 3.23e-01 82.9% 91.9%
3h2bB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.51e-01 96.3% 53.1%
7vkkB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.36e-01 96.3% 45.5%
2nxcA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 43.0 3.56e-01 89.0% 52.3%
2ozvA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 3.54e-01 100.0% 49.5%
1ig0A02 2.60.120.320 Mainly Beta › Sandwich › Jelly Rolls › Thiamin pyrophosphokinase, thiamin-binding domain 0.51 42.0 3.73e-01 96.3% 66.9%
2yvlA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 42.0 3.30e-01 93.9% 52.9%
1ws6A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 3.24e-01 89.0% 43.3%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
184462 520.1.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 0.78 71.0 5.54e-01 100.0% 53.0%
2581337 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.76 68.0 6.54e-01 100.0% 86.0%
2581339 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.75 68.0 6.48e-01 100.0% 86.2%
185692 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.73 67.0 6.09e-01 100.0% 77.1%
3893166 10.4.1.23 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 0.67 54.0 4.76e-01 87.8% 89.2%
4063416 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 51.0 4.33e-01 80.5% 71.5%
3892939 10.32.1.229 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27640 0.65 57.0 4.77e-01 96.3% 89.3%
4929501 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.62 49.0 4.58e-01 87.8% 74.3%
2137580 3156.1.1.13 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 0.55 44.0 4.16e-01 90.2% 74.5%
3908305 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.54 41.0 3.14e-01 82.9% 84.9%
4330070 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 44.0 3.05e-01 95.1% 43.3%
5038445 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 40.0 3.89e-01 87.8% 78.9%
3811574 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.50 42.0 3.97e-01 91.5% 91.0%
D2 high residues 293-384
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
D3 high residues 412-494
PDB
Domain cluster: rep: MT740307.1__QNR53851.1__phiK7A1_063__00061__D140-222