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MG596800.2__AUM59755.1__X__00038
Bact-VirMG596800.2__AUM59755.1__X__00038
Identity
- Accession:
- MG596800 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Taxonomy
TaxID: 2059855
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 160-211
Domain cluster:
rep: ON529867.1__USN16749.1__STRZYGA_00280__00028__D90-136
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.75 | 52.0 | 5.46e-01 | 98.1% | 82.6% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.74 | 64.0 | 5.03e-01 | 100.0% | 46.9% |
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 55.0 | 5.14e-01 | 100.0% | 65.6% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.73 | 62.0 | 5.77e-01 | 100.0% | 77.6% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.72 | 51.0 | 5.26e-01 | 100.0% | 79.6% |
| 1s6lA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.88e-01 | 80.8% | 75.0% |
| 2iw3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 57.0 | 3.83e-01 | 100.0% | 24.2% |
| 2l3nA00 | 1.10.1050.20 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › | 0.66 | 46.0 | 3.74e-01 | 100.0% | 37.5% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.66 | 54.0 | 4.99e-01 | 100.0% | 72.2% |
| 6hn7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 5.08e-01 | 100.0% | 73.6% |
| 4bjqA00 | 1.10.150.770 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 46.0 | 4.00e-01 | 88.5% | 76.9% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 47.0 | 4.18e-01 | 100.0% | 73.4% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.53 | 46.0 | 3.55e-01 | 98.1% | 53.4% |
| 3aq5A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 37.0 | 2.99e-01 | 84.6% | 69.2% |
| 1bccH00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.50 | 37.0 | 3.45e-01 | 80.8% | 75.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.77 | 66.0 | 6.64e-01 | 100.0% | 96.2% |
| 4460243 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.75 | 63.0 | 6.24e-01 | 100.0% | 89.1% |
| 3366705 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 63.0 | 5.87e-01 | 100.0% | 75.4% |
| 4158216 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.75 | 63.0 | 6.03e-01 | 100.0% | 81.7% |
| 3579672 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 62.0 | 6.15e-01 | 100.0% | 89.1% |
| 4456842 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.74 | 61.0 | 5.86e-01 | 100.0% | 80.0% |
| 3622395 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.74 | 60.0 | 5.65e-01 | 100.0% | 73.8% |
| 4564509 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.74 | 63.0 | 6.02e-01 | 100.0% | 83.3% |
| 3288205 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.73 | 59.0 | 5.19e-01 | 100.0% | 60.0% |
| 4196673 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.72 | 63.0 | 6.28e-01 | 100.0% | 96.4% |
| 360918 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 61.0 | 4.78e-01 | 100.0% | 45.3% |
| 4929856 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.71 | 58.0 | 4.89e-01 | 100.0% | 53.3% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 61.0 | 5.59e-01 | 100.0% | 80.0% |
| 4191032 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.69 | 57.0 | 5.87e-01 | 100.0% | 98.0% |
| 4028059 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 57.0 | 5.70e-01 | 100.0% | 90.9% |
| 3849756 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 58.0 | 5.20e-01 | 100.0% | 68.0% |
| 4443612 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.68 | 56.0 | 5.68e-01 | 94.2% | 98.0% |
| 3954355 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.68 | 58.0 | 4.59e-01 | 98.1% | 46.4% |
| 4668445 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 58.0 | 5.77e-01 | 100.0% | 94.5% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.66 | 54.0 | 4.83e-01 | 100.0% | 63.7% |
| 3959614 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 53.0 | 4.56e-01 | 100.0% | 54.4% |
| 3976864 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 54.0 | 4.92e-01 | 100.0% | 77.3% |
| 4957076 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.62 | 51.0 | 5.01e-01 | 100.0% | 90.0% |
| 3587609 | 101.1.4.2 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › LacI | 0.57 | 44.0 | 4.52e-01 | 90.4% | 86.0% |
D2
medium
residues 6-38
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7jgsG01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 63.0 | 4.04e-01 | 100.0% | 19.4% |
| 1ze0A02 | 1.10.4070.10 | Mainly Alpha › Orthogonal Bundle › putative redox-enzyme maturation protein fold › putative redox-enzyme maturation protein domain | 0.76 | 65.0 | 4.97e-01 | 100.0% | 48.7% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 64.0 | 4.76e-01 | 100.0% | 78.8% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.72 | 57.0 | 5.02e-01 | 97.0% | 61.8% |
| 1khcA02 | 1.10.720.50 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › PWWP, helical domain | 0.72 | 56.0 | 4.67e-01 | 100.0% | 60.9% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.72 | 57.0 | 4.01e-01 | 100.0% | 27.5% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.70 | 55.0 | 4.24e-01 | 97.0% | 44.2% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.70 | 50.0 | 4.52e-01 | 81.8% | 54.2% |
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 52.0 | 4.46e-01 | 97.0% | 90.5% |
| 3cl3A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.66 | 54.0 | 4.16e-01 | 97.0% | 38.1% |
| 2cruA01 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.66 | 48.0 | 3.73e-01 | 81.8% | 42.9% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 55.0 | 4.30e-01 | 100.0% | 56.6% |
| 3c4rA00 | 1.10.3600.10 | Mainly Alpha › Orthogonal Bundle › uncharacterized protein encoded by cryptic prophage fold › Putative bacterial toxin ydaT | 0.65 | 51.0 | 3.54e-01 | 93.9% | 48.4% |
| 1a7jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 3.09e-01 | 100.0% | 93.2% |
| 4htlA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 43.0 | 2.72e-01 | 72.7% | 12.6% |
| 2l3fA00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.62 | 50.0 | 3.31e-01 | 100.0% | 26.1% |
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.62 | 46.0 | 4.23e-01 | 97.0% | 96.2% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.61 | 51.0 | 4.31e-01 | 100.0% | 78.0% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.61 | 47.0 | 4.38e-01 | 100.0% | 95.8% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 48.0 | 3.04e-01 | 87.9% | 18.6% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.60 | 46.0 | 3.62e-01 | 84.8% | 42.2% |
| 2fmlB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 3.58e-01 | 93.9% | 40.6% |
| 1dp3A00 | 1.10.10.450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding | 0.59 | 46.0 | 4.02e-01 | 93.9% | 81.8% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.52 | 35.0 | 3.29e-01 | 100.0% | 68.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4956102 | 3473.1.1.1 ↗ | extended segments › Twin-arginine transport (Tat) system component TatA › Twin-arginine transport (Tat) system component TatA › Twin-arginine transport (Tat) system component TatA › TatA_B_E | 0.99 | 91.0 | 6.35e-01 | 100.0% | 36.7% |
| 3275813 | 1134.1.2.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain | 0.97 | 87.0 | 7.46e-01 | 100.0% | 66.0% |
| 5042109 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.95 | 84.0 | 6.36e-01 | 100.0% | 45.2% |
| 4959293 | 3473.1.1.1 ↗ | extended segments › Twin-arginine transport (Tat) system component TatA › Twin-arginine transport (Tat) system component TatA › Twin-arginine transport (Tat) system component TatA › TatA_B_E | 0.93 | 79.0 | 5.61e-01 | 93.9% | 34.4% |
| 4136263 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.93 | 81.0 | 7.24e-01 | 97.0% | 71.1% |
| 3256378 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.93 | 81.0 | 7.23e-01 | 97.0% | 71.1% |
| 3256790 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.89 | 75.0 | 6.01e-01 | 97.0% | 49.2% |
| 3251186 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.88 | 73.0 | 6.44e-01 | 97.0% | 64.0% |
| 4929315 | 3860.1.1.335 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › TatA_B_E | 0.88 | 77.0 | 5.52e-01 | 100.0% | 36.7% |
| 3264037 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.86 | 69.0 | 6.31e-01 | 97.0% | 68.9% |
| 3476467 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.80 | 65.0 | 5.80e-01 | 97.0% | 64.0% |
| 3815708 | 130.1.1.40 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7722 | 0.74 | 58.0 | 5.45e-01 | 97.0% | 71.1% |
| 3274277 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.72 | 56.0 | 3.61e-01 | 100.0% | 17.8% |
| 3725843 | 144.1.1.5 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PLAC8 | 0.71 | 57.0 | 4.14e-01 | 100.0% | 43.6% |
| 223746 | 6099.1.1.1 ↗ | alpha arrays › Uncharacterized protein VV2_0175 › Uncharacterized protein VV2_0175 › Uncharacterized protein VV2_0175 › DUF5062 | 0.70 | 55.0 | 4.24e-01 | 97.0% | 44.2% |
| 4238908 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 58.0 | 3.17e-01 | 93.9% | 6.7% |
| 3386930 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.69 | 53.0 | 4.02e-01 | 90.9% | 36.3% |
| 3887959 | 103.1.1.53 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TTC3_9th | 0.67 | 55.0 | 4.70e-01 | 93.9% | 65.5% |
| 4107638 | 103.1.1.53 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TTC3_9th | 0.64 | 52.0 | 4.14e-01 | 93.9% | 52.9% |
| 3780993 | 3443.1.1.5 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain › TTC3_9th | 0.61 | 44.0 | 3.72e-01 | 93.9% | 45.0% |
| 3391651 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.60 | 46.0 | 2.63e-01 | 87.9% | 10.9% |
| 4942351 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.60 | 51.0 | 3.18e-01 | 97.0% | 23.9% |
| 3918169 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 42.0 | 3.42e-01 | 84.8% | 39.7% |
| 3804296 | 6056.1.1.0 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like | 0.57 | 47.0 | 3.37e-01 | 93.9% | 46.0% |
D3
medium
residues 46-94
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ld7A00 | 6.10.160.20 | Special › Helix non-globular › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.77 | 54.0 | 4.30e-01 | 73.5% | 38.3% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.76 | 52.0 | 5.01e-01 | 71.4% | 63.6% |
| 5gizA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.64 | 47.0 | 3.55e-01 | 81.6% | 88.4% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.64 | 49.0 | 2.86e-01 | 85.7% | 10.5% |
| 3c3dA02 | 1.10.8.240 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain | 0.63 | 44.0 | 3.60e-01 | 73.5% | 100.0% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.62 | 42.0 | 2.98e-01 | 71.4% | 52.9% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.61 | 43.0 | 4.36e-01 | 100.0% | 79.2% |
| 2n1rA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.61 | 45.0 | 3.34e-01 | 81.6% | 43.3% |
| 4axsA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.59 | 45.0 | 2.84e-01 | 85.7% | 78.4% |
| 4ou7A00 | 1.10.8.1180 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 40.0 | 3.54e-01 | 71.4% | 94.4% |
| 3vkgA10 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 50.0 | 3.35e-01 | 100.0% | 42.3% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.57 | 42.0 | 3.46e-01 | 81.6% | 89.4% |
| 7jgsG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.56e-01 | 89.8% | 50.0% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 45.0 | 3.93e-01 | 93.9% | 94.7% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 44.0 | 4.26e-01 | 93.9% | 96.5% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.54 | 39.0 | 3.75e-01 | 83.7% | 75.8% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 47.0 | 3.75e-01 | 100.0% | 64.3% |
| 1uj8A00 | 1.10.10.600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IscX-like | 0.53 | 43.0 | 3.85e-01 | 91.8% | 67.1% |
| 2r18A02 | 1.10.8.880 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 | 0.52 | 39.0 | 3.74e-01 | 98.0% | 69.5% |
| 2ebiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 41.0 | 3.75e-01 | 89.8% | 71.2% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.28e-01 | 91.8% | 47.6% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.51 | 43.0 | 3.50e-01 | 100.0% | 87.9% |
| 2wiyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 40.0 | 2.51e-01 | 100.0% | 62.9% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.50 | 37.0 | 3.19e-01 | 83.7% | 49.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954375 | 601.7.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Abi_C | 0.78 | 69.0 | 5.17e-01 | 100.0% | 77.5% |
| 1826874 | 130.1.1.10 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP30_Sin3_bdg | 0.77 | 54.0 | 5.09e-01 | 73.5% | 62.1% |
| 4999712 | 601.7.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Abi_C | 0.72 | 62.0 | 4.52e-01 | 100.0% | 67.1% |
| 3169158 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.72 | 50.0 | 4.14e-01 | 73.5% | 41.1% |
| 5017862 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.68 | 59.0 | 4.42e-01 | 100.0% | 64.8% |
| 3607576 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.68 | 55.0 | 5.17e-01 | 89.8% | 81.7% |
| 4983621 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.67 | 55.0 | 4.29e-01 | 100.0% | 62.5% |
| 3816901 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.66 | 56.0 | 5.45e-01 | 100.0% | 83.6% |
| 3304111 | 185.1.1.3 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Hydrophob_seed | 0.64 | 49.0 | 4.27e-01 | 83.7% | 94.6% |
| 3764771 | 101.1.2.365 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEK_C | 0.63 | 46.0 | 4.43e-01 | 85.7% | 69.1% |
| 3333032 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.63 | 50.0 | 4.77e-01 | 89.8% | 74.1% |
| 3840404 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.63 | 45.0 | 4.25e-01 | 85.7% | 63.3% |
| 3806111 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.61 | 48.0 | 4.40e-01 | 89.8% | 66.2% |
| 4166995 | 109.4.1.81 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N | 0.60 | 45.0 | 2.82e-01 | 81.6% | 32.6% |
| 4235730 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.60 | 46.0 | 4.33e-01 | 83.7% | 71.7% |
| 5049947 | 2002.1.1.452 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM_C | 0.60 | 42.0 | 2.55e-01 | 77.6% | 30.9% |
| 3444283 | 101.1.2.365 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEK_C | 0.59 | 47.0 | 4.64e-01 | 89.8% | 81.5% |
| 4955389 | 101.1.1.542 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF790 | 0.59 | 47.0 | 4.57e-01 | 89.8% | 80.0% |
| 3736681 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 44.0 | 3.76e-01 | 83.7% | 50.6% |
| 3631692 | 101.1.1.176 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DEK_C | 0.58 | 46.0 | 4.35e-01 | 89.8% | 73.3% |
| 3462913 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.58 | 44.0 | 4.06e-01 | 89.8% | 64.6% |
| 3507881 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.58 | 45.0 | 4.42e-01 | 89.8% | 80.0% |
| 5028212 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.57 | 47.0 | 3.51e-01 | 100.0% | 95.3% |
| 3313260 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.57 | 46.0 | 4.13e-01 | 89.8% | 62.9% |
| 4438754 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.57 | 45.0 | 4.40e-01 | 89.8% | 80.0% |
| 3735853 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.57 | 45.0 | 4.28e-01 | 89.8% | 73.3% |
| 4513921 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.57 | 45.0 | 4.29e-01 | 91.8% | 73.3% |
| 3238416 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 42.0 | 3.68e-01 | 87.8% | 60.0% |
| 3666433 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 42.0 | 3.21e-01 | 89.8% | 35.2% |
| 5042781 | 101.1.2.599 ↗ | alpha arrays › HTH › HTH › winged helix domain › ELP3_N | 0.53 | 37.0 | 3.48e-01 | 83.7% | 56.9% |
| 3341621 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.53 | 41.0 | 3.18e-01 | 83.7% | 47.3% |
| 3174047 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.52 | 43.0 | 3.24e-01 | 93.9% | 64.0% |
| 3246361 | 101.1.17.18 ↗ | alpha arrays › HTH › HTH › FF domain › FF_PRPF40A | 0.52 | 41.0 | 3.83e-01 | 91.8% | 69.2% |
| 3927575 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.51 | 41.0 | 3.94e-01 | 100.0% | 81.7% |
| 3886349 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.51 | 36.0 | 2.63e-01 | 79.6% | 63.6% |
| 3503207 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.50 | 44.0 | 3.53e-01 | 100.0% | 64.3% |