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MG603697.1__AUG88459.1__VPR_095__00095

Bact-Vir

MG603697.1__AUG88459.1__VPR_095__00095

Identity

Accession:
MG603697 ↗
Kingdom:
phage

Quality

78.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Grimontviridae› Dalianvirus› Vibrio_phage_Vp_R1

TaxID: 2059867

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-107
PDB
Domain cluster: rep: GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00134__D97-202
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qzbA00 2.60.460.10 Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain 0.63 36.0 3.22e-01 78.1% 40.0%
2arhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 43.0 3.77e-01 86.7% 50.0%
3bgaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 50.0 3.63e-01 89.5% 76.7%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 33.0 3.71e-01 73.3% 74.1%
1mbmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 31.0 3.67e-01 82.9% 77.8%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 43.0 3.33e-01 81.9% 88.7%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 40.0 3.36e-01 75.2% 82.0%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 3.09e-01 87.6% 45.2%
5xrwC00 2.30.330.10 Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like 0.55 28.0 3.14e-01 91.4% 60.3%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.55 39.0 3.57e-01 75.2% 86.6%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.78e-01 81.0% 64.3%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 44.0 3.96e-01 97.1% 89.4%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 34.0 3.96e-01 79.0% 100.0%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 34.0 3.93e-01 72.4% 97.2%
3dsbA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 39.0 3.97e-01 82.9% 96.0%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 34.0 3.62e-01 75.2% 80.2%
1j31A00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.50 37.0 2.84e-01 78.1% 90.8%
3ilvA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.50 36.0 2.83e-01 77.1% 84.2%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3602725 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.73 47.0 5.62e-01 81.0% 98.6%
5069567 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.70 46.0 5.46e-01 81.9% 100.0%
5063466 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.68 53.0 5.67e-01 99.0% 97.8%
4958977 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.68 49.0 5.30e-01 92.4% 88.9%
5082740 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.67 53.0 5.59e-01 98.1% 94.7%
4943586 243.6.1.12 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA 0.66 48.0 5.36e-01 89.5% 100.0%
4948218 243.6.1.12 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA 0.65 49.0 5.30e-01 89.5% 97.6%
5022814 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.64 45.0 5.13e-01 85.7% 100.0%
184898 6043.1.1.1 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › DUF1131 0.64 34.0 4.02e-01 76.2% 76.1%
5083058 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.63 46.0 5.15e-01 88.6% 100.0%
4995507 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.63 42.0 4.86e-01 88.6% 97.3%
3627111 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 49.0 3.20e-01 82.9% 51.2%
4970694 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.62 50.0 5.09e-01 98.1% 87.6%
4992194 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.61 48.0 5.10e-01 92.4% 98.9%
4960033 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.60 43.0 3.61e-01 74.3% 82.8%
3969970 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.59 34.0 3.89e-01 71.4% 78.7%
3406355 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.58 30.0 3.68e-01 75.2% 83.3%
4971247 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 37.0 4.13e-01 83.8% 85.0%
3988706 243.3.1.13 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.57 35.0 4.12e-01 78.1% 91.4%
4952427 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 37.0 4.41e-01 74.3% 98.6%
5072132 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 37.0 4.17e-01 83.8% 86.3%
4965849 3435.1.1.9 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF4747 0.57 38.0 2.86e-01 85.7% 27.8%
5002621 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 36.0 2.71e-01 85.7% 26.4%
4208191 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 35.0 4.01e-01 71.4% 86.3%
3177221 3080.1.1.0 ↗ a+b complex topology › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins 0.54 43.0 3.15e-01 85.7% 84.8%
4324615 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.53 40.0 3.52e-01 80.0% 89.0%
3163979 71.1.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.52 39.0 3.25e-01 79.0% 82.1%
3857553 844.1.1.1 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Tub 0.52 37.0 2.96e-01 73.3% 77.3%
4137746 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 35.0 3.82e-01 75.2% 84.7%
3965943 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.51 43.0 3.58e-01 92.4% 97.9%
5016827 5090.1.1.11 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N 0.51 38.0 3.69e-01 79.0% 90.8%
4031984 3894.1.1.1 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.51 37.0 3.54e-01 83.8% 64.0%
4283257 243.3.1.52 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 0.51 41.0 2.88e-01 86.7% 56.7%
1174443 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.50 38.0 2.72e-01 81.0% 87.9%
3222974 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.50 36.0 3.68e-01 74.3% 74.3%
D2 high residues 137-182
PDB
Domain cluster: representative
CATH (79)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.85 67.0 5.94e-01 87.0% 98.5%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.85 67.0 6.38e-01 87.0% 98.1%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 69.0 6.21e-01 89.1% 85.5%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 70.0 6.19e-01 91.3% 93.9%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 67.0 6.06e-01 87.0% 90.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.84 70.0 6.93e-01 91.3% 95.8%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 67.0 5.94e-01 89.1% 92.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 74.0 6.57e-01 100.0% 80.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 67.0 6.20e-01 89.1% 96.6%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 72.0 6.30e-01 97.8% 79.4%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 65.0 6.06e-01 87.0% 98.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 71.0 6.40e-01 95.7% 87.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 66.0 5.76e-01 89.1% 81.4%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 66.0 6.04e-01 89.1% 91.7%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 67.0 6.00e-01 91.3% 95.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 70.0 6.50e-01 97.8% 93.2%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 65.0 6.04e-01 89.1% 98.3%
2gtjA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 65.0 5.56e-01 89.1% 77.0%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 64.0 5.89e-01 89.1% 93.3%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.32e-01 100.0% 84.1%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 64.0 6.14e-01 91.3% 94.3%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 65.0 5.77e-01 91.3% 87.9%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.07e-01 100.0% 91.4%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 62.0 5.52e-01 89.1% 80.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 69.0 6.01e-01 100.0% 73.9%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 63.0 5.54e-01 93.5% 73.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 5.55e-01 95.7% 78.2%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 63.0 5.55e-01 93.5% 74.6%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 61.0 5.65e-01 89.1% 95.0%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.77 55.0 4.58e-01 76.1% 81.2%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 61.0 5.52e-01 89.1% 93.8%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 6.08e-01 89.1% 97.9%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 66.0 5.40e-01 100.0% 74.4%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 60.0 4.93e-01 89.1% 64.0%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 63.0 5.50e-01 100.0% 93.2%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 53.0 3.64e-01 78.3% 63.9%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 60.0 5.32e-01 91.3% 94.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 5.27e-01 100.0% 85.7%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 57.0 5.25e-01 89.1% 91.8%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 42.0 3.80e-01 78.3% 43.5%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 58.0 4.72e-01 93.5% 81.6%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.49e-01 97.8% 94.5%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 52.0 3.51e-01 82.6% 39.9%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.65e-01 95.7% 98.0%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 51.0 4.11e-01 82.6% 66.7%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 4.91e-01 84.8% 83.6%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.69 53.0 4.82e-01 89.1% 72.7%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.68 54.0 5.56e-01 89.1% 97.7%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 48.0 4.20e-01 76.1% 57.5%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 52.0 4.56e-01 89.1% 75.3%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.68 51.0 3.58e-01 84.8% 31.4%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 52.0 4.69e-01 89.1% 90.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 5.41e-01 95.7% 94.0%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 55.0 4.23e-01 91.3% 96.2%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.67 57.0 3.76e-01 97.8% 51.0%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 4.74e-01 87.0% 81.0%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 55.0 4.32e-01 93.5% 95.8%
4ntcA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 48.0 3.19e-01 82.6% 74.6%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 52.0 3.24e-01 95.7% 23.3%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.65 56.0 4.08e-01 100.0% 75.9%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.64 46.0 4.06e-01 76.1% 95.7%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 47.0 2.79e-01 80.4% 39.5%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.64 53.0 3.30e-01 100.0% 19.6%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.64 52.0 4.43e-01 93.5% 97.5%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 45.0 2.94e-01 82.6% 52.5%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.62 42.0 2.95e-01 71.7% 20.9%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.62 50.0 4.02e-01 93.5% 92.8%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 48.0 3.42e-01 89.1% 79.5%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 43.0 3.76e-01 84.8% 47.2%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 44.0 3.08e-01 82.6% 39.9%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.60 43.0 3.01e-01 76.1% 57.1%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.59 48.0 4.04e-01 100.0% 91.0%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.58 46.0 3.64e-01 93.5% 86.4%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.58 40.0 3.85e-01 76.1% 62.1%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 46.0 3.18e-01 97.8% 63.7%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 48.0 3.13e-01 100.0% 70.0%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.54 43.0 3.38e-01 97.8% 91.5%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.53 39.0 3.15e-01 84.8% 85.4%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 2.61e-01 91.3% 46.8%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4014906 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.91 74.0 6.00e-01 87.0% 56.2%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.91 75.0 7.07e-01 89.1% 83.6%
3621642 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.89 73.0 5.99e-01 89.1% 70.0%
3533318 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.89 75.0 7.33e-01 91.3% 94.0%
3573262 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.89 73.0 5.72e-01 89.1% 62.2%
3840052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 71.0 7.56e-01 89.1% 100.0%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.87 74.0 7.18e-01 91.3% 92.0%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.87 69.0 6.14e-01 87.0% 95.4%
3573620 4.1.1.318 ↗ beta barrels › SH3 › SH3 › SH3 › PF26085 0.87 68.0 6.21e-01 84.8% 91.7%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.87 74.0 6.09e-01 93.5% 61.3%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.87 75.0 5.46e-01 95.7% 44.2%
3304602 4.1.1.427 ↗ beta barrels › SH3 › SH3 › SH3 › F-box 0.87 75.0 5.85e-01 95.7% 51.6%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.87 75.0 5.75e-01 95.7% 50.0%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.86 74.0 5.47e-01 95.7% 46.1%
4024411 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 70.0 6.60e-01 89.1% 74.5%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.86 72.0 7.00e-01 91.3% 92.0%
3600486 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 69.0 5.34e-01 89.1% 56.0%
3776390 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.86 70.0 5.13e-01 89.1% 49.6%
3513923 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 70.0 5.86e-01 89.1% 74.7%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 69.0 6.30e-01 89.1% 93.3%
1263713 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.85 73.0 7.05e-01 95.7% 96.2%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.85 75.0 4.77e-01 97.8% 24.3%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 68.0 5.91e-01 89.1% 80.0%
3841524 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.85 69.0 5.11e-01 89.1% 51.8%
3993250 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.84 76.0 7.18e-01 100.0% 92.7%
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.84 74.0 7.26e-01 97.8% 98.0%
3326132 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 72.0 6.41e-01 95.7% 75.4%
3496355 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 64.0 6.04e-01 82.6% 96.4%
3241817 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 72.0 6.59e-01 95.7% 90.0%
4024913 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 74.0 6.62e-01 100.0% 80.0%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 73.0 5.66e-01 95.7% 54.7%
3491137 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 69.0 6.33e-01 91.3% 95.0%
3929260 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 71.0 6.71e-01 93.5% 92.7%
3267345 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 68.0 6.38e-01 89.1% 83.6%
3918340 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.84 66.0 5.74e-01 87.0% 81.4%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 73.0 6.71e-01 97.8% 83.3%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.83 70.0 6.85e-01 93.5% 98.0%
3626531 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 72.0 5.77e-01 97.8% 66.7%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.83 70.0 6.83e-01 93.5% 96.0%
3413864 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.83 67.0 4.51e-01 89.1% 37.0%
3879164 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.83 67.0 5.66e-01 89.1% 77.3%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.83 73.0 6.45e-01 97.8% 78.5%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 70.0 6.08e-01 95.7% 91.4%
3498145 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 67.0 5.96e-01 89.1% 87.5%
3619599 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.82 68.0 5.75e-01 91.3% 76.0%
3502290 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 74.0 6.72e-01 100.0% 90.0%
3842062 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.82 66.0 5.08e-01 89.1% 58.0%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.82 67.0 5.58e-01 91.3% 71.2%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 66.0 5.72e-01 89.1% 80.0%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.82 66.0 5.80e-01 91.3% 81.4%
3622389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.45e-01 100.0% 81.5%
3372822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 69.0 5.89e-01 95.7% 80.0%
3514453 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 67.0 5.66e-01 91.3% 76.0%
3900733 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.81 65.0 5.69e-01 89.1% 81.4%
3554293 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.81 68.0 6.09e-01 93.5% 90.8%
3479350 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 65.0 5.31e-01 89.1% 65.9%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 69.0 5.85e-01 95.7% 65.3%
4127826 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.81 66.0 5.92e-01 91.3% 98.5%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 66.0 5.55e-01 91.3% 72.2%
3556601 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.81 71.0 6.29e-01 97.8% 90.8%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.81 65.0 4.12e-01 89.1% 25.5%
1032191 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.81 69.0 5.82e-01 95.7% 64.9%
3924338 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 64.0 5.62e-01 89.1% 80.0%
2831843 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 69.0 5.27e-01 95.7% 48.1%
3855972 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.81 70.0 6.25e-01 97.8% 78.5%
3554995 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 66.0 5.74e-01 91.3% 81.4%
3523979 604.12.1.118 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 0.80 68.0 6.19e-01 93.5% 80.0%
3521739 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.80 65.0 5.24e-01 89.1% 65.9%
3373330 4.1.1.337 ↗ beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II 0.80 69.0 5.87e-01 97.8% 69.3%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.46e-01 100.0% 96.7%
4929875 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.80 66.0 5.19e-01 95.7% 54.0%
3779830 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.80 71.0 5.63e-01 100.0% 65.6%
3245032 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 71.0 5.98e-01 100.0% 96.0%
1068760 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.79 64.0 5.40e-01 91.3% 64.1%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.79 68.0 4.61e-01 97.8% 39.4%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.79 70.0 5.68e-01 100.0% 67.1%
3893368 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.79 69.0 6.12e-01 97.8% 92.3%
3397846 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.56e-01 100.0% 92.7%
3572393 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.78 69.0 5.99e-01 100.0% 85.7%
3556321 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.78 68.0 5.68e-01 100.0% 91.3%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 6.49e-01 100.0% 100.0%
3636812 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 61.0 5.50e-01 91.3% 87.7%
5022448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 5.55e-01 97.8% 94.7%
162525 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 58.0 4.62e-01 89.1% 54.9%
3263031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.80e-01 100.0% 86.2%
4165723 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.76 65.0 5.86e-01 100.0% 75.4%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 61.0 6.02e-01 95.7% 100.0%
3995675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 59.0 5.47e-01 91.3% 98.3%
3977126 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.73 55.0 5.27e-01 84.8% 83.6%
5063311 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.71 54.0 5.51e-01 87.0% 100.0%
3638043 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.71 57.0 3.54e-01 93.5% 25.4%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.70 57.0 5.40e-01 93.5% 92.7%
3207383 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 56.0 3.45e-01 93.5% 24.3%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 56.0 5.33e-01 93.5% 92.7%
4964699 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.66 49.0 3.90e-01 82.6% 83.0%
5752 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.65 46.0 3.22e-01 78.3% 57.1%
4935165 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.60 47.0 3.14e-01 93.5% 98.1%
4988423 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.55 43.0 3.80e-01 100.0% 80.0%