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MG640035.1__AUG84886.1__Athena1_0028__00026
Bact-VirMG640035.1__AUG84886.1__Athena1_0028__00026
Identity
- Accession:
- MG640035 ↗
- Kingdom:
- phage
Quality
92.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-71
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nd4A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.60 | 42.0 | 3.17e-01 | 74.2% | 84.6% |
| 3f0zA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.59 | 45.0 | 3.82e-01 | 86.4% | 65.3% |
| 4o1gA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 46.0 | 2.97e-01 | 86.4% | 82.0% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.58 | 45.0 | 3.49e-01 | 93.9% | 64.1% |
| 3uo9C01 | 1.10.238.210 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.57 | 44.0 | 4.27e-01 | 87.9% | 98.7% |
| 1pvmA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 41.0 | 3.13e-01 | 78.8% | 54.5% |
| 1xgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.46e-01 | 97.0% | 84.4% |
| 2mpcA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.55 | 46.0 | 4.25e-01 | 100.0% | 80.0% |
| 8h1kA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 45.0 | 2.73e-01 | 92.4% | 83.3% |
| 1htjF00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.54 | 43.0 | 3.31e-01 | 95.5% | 86.3% |
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.51 | 39.0 | 3.36e-01 | 87.9% | 49.6% |
| 5iz3A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.51 | 40.0 | 2.97e-01 | 86.4% | 88.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3706008 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.70 | 51.0 | 4.75e-01 | 75.8% | 72.5% |
| 4929738 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.69 | 57.0 | 5.48e-01 | 93.9% | 100.0% |
| 3719802 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 51.0 | 4.46e-01 | 100.0% | 85.5% |
| 3432132 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.60 | 50.0 | 3.89e-01 | 98.5% | 97.6% |
| 3499433 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 50.0 | 3.10e-01 | 98.5% | 59.6% |
| 4286215 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 42.0 | 4.28e-01 | 75.8% | 78.5% |
| 3731182 | 102.1.1.116 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_6 | 0.59 | 44.0 | 4.30e-01 | 83.3% | 92.0% |
| 4127906 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.58 | 42.0 | 4.44e-01 | 77.3% | 98.2% |
| 3988077 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.75e-01 | 100.0% | 92.9% |
| 4670849 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 41.0 | 3.81e-01 | 77.3% | 56.7% |
| 4944339 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 49.0 | 4.99e-01 | 97.0% | 100.0% |
| 4039362 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.57 | 44.0 | 4.62e-01 | 95.5% | 96.7% |
| 3291695 | 4019.1.1.6 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.57 | 47.0 | 3.86e-01 | 100.0% | 50.7% |
| 4946778 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 46.0 | 4.69e-01 | 95.5% | 100.0% |
| 4375269 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 44.0 | 4.46e-01 | 95.5% | 89.2% |
| 3743250 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 41.0 | 4.36e-01 | 78.8% | 96.4% |
| 4142235 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 42.0 | 3.71e-01 | 83.3% | 54.0% |
| 4551162 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 44.0 | 4.37e-01 | 97.0% | 82.9% |
| 4097210 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 42.0 | 4.46e-01 | 83.3% | 98.2% |
| 3290494 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 39.0 | 4.31e-01 | 75.8% | 98.0% |
| 3963419 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 42.0 | 4.19e-01 | 83.3% | 80.9% |
| 4640142 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.55 | 42.0 | 4.40e-01 | 97.0% | 93.3% |
| 4401871 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.55 | 41.0 | 4.40e-01 | 81.8% | 100.0% |
| 4389062 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.55 | 39.0 | 4.07e-01 | 80.3% | 83.3% |
| 5030217 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.55 | 46.0 | 4.60e-01 | 100.0% | 100.0% |
| 4588622 | 101.1.2.791 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28729 | 0.55 | 46.0 | 4.49e-01 | 100.0% | 96.0% |
| 4557606 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.55 | 39.0 | 3.62e-01 | 77.3% | 56.7% |
| 4649460 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.54 | 42.0 | 4.16e-01 | 95.5% | 82.9% |
| 4549467 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.54 | 41.0 | 4.20e-01 | 97.0% | 93.3% |
| 4221363 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.54 | 43.0 | 4.25e-01 | 97.0% | 85.7% |
| 4028059 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.53 | 38.0 | 4.06e-01 | 80.3% | 100.0% |
| 3729235 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.53 | 40.0 | 4.21e-01 | 97.0% | 95.0% |
| None | — | 0.53 | 40.0 | 3.33e-01 | 84.8% | 64.0% | |
| 4976712 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.42e-01 | 77.3% | 55.6% |
| 3726631 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 43.0 | 3.90e-01 | 93.9% | 95.6% |
| 4183912 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.51 | 40.0 | 3.93e-01 | 89.4% | 78.7% |
| 4553544 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.51 | 37.0 | 2.73e-01 | 78.8% | 27.2% |
| 3164822 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.51 | 42.0 | 2.99e-01 | 100.0% | 92.9% |