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MG641885.1__AUZ95546.1__X__00055
Bact-VirMG641885.1__AUZ95546.1__X__00055
Identity
- Accession:
- MG641885 ↗
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-100
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1werA02 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.59 | 34.0 | 2.96e-01 | 81.4% | 36.5% |
| 3a7kB00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 49.0 | 3.61e-01 | 99.0% | 79.1% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.54 | 37.0 | 4.18e-01 | 97.9% | 95.8% |
| 5hmlA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.53 | 30.0 | 3.27e-01 | 92.8% | 65.0% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 46.0 | 3.61e-01 | 100.0% | 90.8% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.18e-01 | 89.7% | 52.2% |
| 3uxuA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.51 | 39.0 | 3.38e-01 | 83.5% | 88.7% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 32.0 | 3.71e-01 | 78.4% | 92.4% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 32.0 | 2.71e-01 | 87.6% | 37.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060852 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.68 | 32.0 | 4.36e-01 | 71.1% | 93.3% |
| 3466771 | 375.3.1.2 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-CSL | 0.67 | 32.0 | 4.11e-01 | 93.8% | 80.0% |
| 3225917 | 2498.1.1.23 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 | 0.58 | 50.0 | 3.07e-01 | 100.0% | 36.5% |
| 4408024 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.57 | 30.0 | 3.69e-01 | 89.7% | 81.7% |
| 3799847 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.55 | 27.0 | 3.04e-01 | 86.6% | 58.6% |
| 4537528 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 27.0 | 3.12e-01 | 89.7% | 61.4% |
| 4947471 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 39.0 | 2.97e-01 | 76.3% | 71.2% |
| 5044389 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.54 | 23.0 | 3.09e-01 | 93.8% | 74.0% |
| 4555698 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.53 | 44.0 | 3.35e-01 | 93.8% | 76.6% |
| 3927677 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 24.0 | 3.39e-01 | 97.9% | 91.1% |
| 4211209 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 29.0 | 3.48e-01 | 89.7% | 80.0% |
| 5051943 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 44.0 | 3.40e-01 | 100.0% | 80.4% |
| 44680 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.51 | 31.0 | 3.18e-01 | 99.0% | 61.1% |