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MG649966.1__AUG85048.1__CETO_41__00041

Bact-Vir

MG649966.1__AUG85048.1__CETO_41__00041

Identity

Accession:
MG649966 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-63
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 46.0 3.71e-01 80.6% 64.7%
4a0tA01 6.20.80.10 Special › Other non-globular › Glycosyl hydrolase fold › 0.56 40.0 4.10e-01 77.4% 98.4%
1cczA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 3.67e-01 80.6% 71.0%
3otxB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 37.0 2.50e-01 71.0% 29.4%
5yxkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.39e-01 79.0% 67.3%
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 41.0 3.00e-01 83.9% 76.0%
1p49A03 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.50 34.0 2.94e-01 71.0% 78.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4374595 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.65 45.0 4.38e-01 77.4% 65.7%
4319423 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.64 43.0 4.69e-01 72.6% 100.0%
4482168 7515.1.1.4 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,Sulfatase_C 0.58 46.0 2.79e-01 90.3% 88.8%
3748270 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 42.0 3.55e-01 79.0% 61.0%
3411216 79.1.1.18 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 0.55 45.0 3.97e-01 95.2% 79.0%
3784847 11.1.1.378 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 0.55 38.0 2.83e-01 71.0% 53.5%
3887881 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.78e-01 80.6% 82.5%
3585710 2484.1.1.36 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.54 38.0 2.91e-01 74.2% 62.1%
3912902 233.1.1.3 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha 0.54 37.0 3.31e-01 71.0% 52.9%
3922657 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 38.0 3.36e-01 77.4% 65.3%
4026913 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.51 38.0 3.46e-01 80.6% 90.6%
5001398 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.51 42.0 2.75e-01 98.4% 33.0%
5049994 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.51 36.0 3.46e-01 77.4% 96.0%
D2 high residues 70-188
PDB
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.65 50.0 4.91e-01 100.0% 76.2%
2v5yA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 40.0 4.36e-01 98.3% 76.3%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 45.0 4.88e-01 100.0% 87.8%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 39.0 3.98e-01 100.0% 61.7%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 43.0 4.70e-01 100.0% 91.5%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 45.0 4.56e-01 100.0% 78.5%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 35.0 3.62e-01 84.9% 60.5%
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 45.0 4.91e-01 100.0% 98.0%
4e9lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 4.12e-01 99.2% 80.2%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.56 44.0 4.29e-01 88.2% 74.4%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.56 50.0 3.80e-01 100.0% 98.6%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 4.24e-01 100.0% 87.0%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.55 41.0 2.96e-01 79.0% 98.7%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.55 44.0 4.45e-01 99.2% 86.3%
2vovA00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 3.74e-01 99.2% 85.2%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 44.0 3.60e-01 85.7% 89.5%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.55 41.0 3.94e-01 79.0% 97.1%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 4.63e-01 100.0% 96.4%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.54 48.0 4.50e-01 100.0% 80.6%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.21e-01 100.0% 81.5%
3klqA01 2.60.40.3050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.81e-01 89.1% 71.4%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 3.94e-01 98.3% 79.2%
3ww3A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 38.0 3.06e-01 72.3% 86.3%
4qa8A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.53 42.0 3.52e-01 84.9% 90.0%
4b7hA02 2.40.180.10 Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain 0.53 45.0 3.57e-01 95.8% 87.9%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.53 40.0 3.56e-01 81.5% 94.4%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.17e-01 100.0% 97.6%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 44.0 4.18e-01 91.6% 98.6%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.52 47.0 4.38e-01 99.2% 99.3%
2g30A01 2.60.40.1150 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.91e-01 100.0% 78.6%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.87e-01 90.8% 86.3%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.52 41.0 3.37e-01 86.6% 95.3%
1r17A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 46.0 4.22e-01 100.0% 84.8%
2vvfA02 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.55e-01 100.0% 91.4%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 40.0 3.98e-01 84.0% 89.9%
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 38.0 4.15e-01 100.0% 95.9%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.51 45.0 3.62e-01 99.2% 96.4%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.49e-01 100.0% 97.0%
2okxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 42.0 3.60e-01 100.0% 55.8%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 4.08e-01 97.5% 84.4%
5jtwA01 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.51 38.0 3.62e-01 100.0% 67.6%
4c91A04 2.60.120.1620 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.92e-01 100.0% 81.5%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.50 45.0 4.55e-01 100.0% 100.0%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.50 43.0 3.37e-01 94.1% 66.2%
2qqpA03 2.60.40.4260 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.85e-01 86.6% 97.1%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5056882 4081.1.1.12 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.71 43.0 3.52e-01 100.0% 34.6%
4038477 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.61 51.0 3.82e-01 91.6% 94.0%
3727890 5.1.4.97 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.61 46.0 3.04e-01 80.7% 85.8%
3496034 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 45.0 4.22e-01 81.5% 66.2%
3604240 71.1.1.25 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF6612 0.58 44.0 3.66e-01 79.0% 87.1%
4329332 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.58 43.0 3.04e-01 79.0% 88.2%
3608096 331.9.1.4 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.57 44.0 4.41e-01 89.1% 81.4%
3477921 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 50.0 4.66e-01 100.0% 77.4%
4665454 10.32.1.244 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.56 48.0 4.81e-01 100.0% 90.8%
3287504 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 42.0 4.51e-01 100.0% 96.0%
3888419 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.55 43.0 3.34e-01 84.0% 90.2%
4999573 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 36.0 3.99e-01 100.0% 84.2%
3598878 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 44.0 3.96e-01 87.4% 82.2%
3761249 11.2.1.36 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MAP10_N 0.55 41.0 4.00e-01 79.8% 76.3%
4945026 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 46.0 4.77e-01 100.0% 95.5%
3818841 331.3.1.17 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.55 44.0 3.83e-01 88.2% 84.7%
5071112 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 48.0 4.64e-01 100.0% 85.9%
3227607 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.54 41.0 3.13e-01 80.7% 90.7%
5016887 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.16e-01 99.2% 79.2%
3708445 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 48.0 4.69e-01 100.0% 94.6%
4164247 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 33.0 3.77e-01 100.0% 85.9%
3257317 331.3.1.31 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1990 0.53 42.0 3.60e-01 86.6% 72.7%
4022879 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.53 46.0 3.43e-01 100.0% 79.1%
3968722 5084.6.1.0 beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel 0.53 43.0 3.43e-01 89.1% 55.7%
4928158 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.53 43.0 4.20e-01 87.4% 78.2%
3623537 11.2.1.50 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GDE1 0.52 39.0 3.53e-01 79.8% 78.2%
1018790 9.2.1.1 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.52 41.0 3.98e-01 83.2% 99.2%
3618320 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 40.0 4.19e-01 100.0% 92.6%
4488223 5087.2.1.2 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 0.52 43.0 3.25e-01 92.4% 68.4%
5056643 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.52 42.0 3.57e-01 100.0% 53.3%
3596678 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 4.46e-01 98.3% 100.0%
3740278 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 39.0 3.67e-01 79.8% 68.8%
5001285 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 46.0 3.90e-01 100.0% 98.0%
3183254 10.32.1.237 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mid1 0.51 46.0 4.50e-01 100.0% 93.1%
3535908 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 35.0 3.62e-01 100.0% 76.4%
3880284 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.51 42.0 3.53e-01 89.9% 79.0%
3400912 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.50 42.0 3.46e-01 90.8% 76.4%
4232738 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.50 35.0 3.62e-01 99.2% 75.7%
4260202 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.50 46.0 3.64e-01 100.0% 80.4%
4449332 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.50 44.0 3.20e-01 96.6% 67.9%
4147907 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.50 40.0 3.83e-01 84.9% 97.1%
3514135 5084.1.1.19 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › BCSC_C 0.50 38.0 3.41e-01 79.0% 86.1%
5022112 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.50 37.0 3.24e-01 78.2% 90.0%