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MG676223.1__AVR75893.1__ValSw33_69__00069
Bact-VirMG676223.1__AVR75893.1__ValSw33_69__00069
Identity
- Accession:
- MG676223 ↗
- Kingdom:
- phage
Quality
64.1
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 187-229
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3igmA00 | 1.20.5.2050 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 44.0 | 4.00e-01 | 100.0% | 55.4% |
| 2v3aA03 | 3.30.390.120 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.57 | 37.0 | 3.36e-01 | 100.0% | 45.3% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.55 | 39.0 | 2.51e-01 | 100.0% | 14.2% |
| 5c98B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 39.0 | 2.87e-01 | 100.0% | 26.4% |
| 6melB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 44.0 | 3.07e-01 | 95.3% | 51.0% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.54 | 44.0 | 2.94e-01 | 100.0% | 22.0% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 37.0 | 3.02e-01 | 100.0% | 34.7% |
| 3facA00 | 2.170.150.70 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › | 0.51 | 41.0 | 3.08e-01 | 90.7% | 46.8% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 39.0 | 2.87e-01 | 100.0% | 27.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4488625 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.62 | 42.0 | 2.51e-01 | 72.1% | 23.6% |
| 3468853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 4.38e-01 | 88.4% | 85.7% |
| 3636133 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.61 | 45.0 | 3.31e-01 | 81.4% | 80.7% |
| 5027403 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.59 | 49.0 | 3.16e-01 | 95.3% | 20.0% |
| 3258814 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 3.24e-01 | 79.1% | 80.0% |
| 4968929 | 1.1.7.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_M18 | 0.58 | 51.0 | 3.60e-01 | 100.0% | 77.0% |
| 4315143 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.56 | 45.0 | 2.92e-01 | 100.0% | 18.3% |
| 4668505 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.55 | 45.0 | 2.92e-01 | 100.0% | 19.1% |
| 4983413 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.55 | 46.0 | 2.91e-01 | 95.3% | 33.2% |
| 4973359 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.54 | 42.0 | 2.89e-01 | 97.7% | 100.0% |
| 3261595 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 42.0 | 2.77e-01 | 100.0% | 35.8% |
| 5055757 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.72e-01 | 97.7% | 68.0% |
| 4024560 | 208.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep, GMPPB_C | 0.51 | 40.0 | 2.76e-01 | 97.7% | 23.1% |
| 3258302 | 63.1.1.0 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain | 0.51 | 37.0 | 2.77e-01 | 88.4% | 99.3% |
| 4029987 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.51 | 36.0 | 2.30e-01 | 90.7% | 33.9% |
D2
medium
residues 304-451
Domain cluster:
rep: NC_052650__YP_009981828.1__JR051-gp22__00022__D4-23_42-109