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MG708275.1__AUN43421.1__X__00016
Bact-VirMG708275.1__AUN43421.1__X__00016
Identity
- Accession:
- MG708275 ↗
- Kingdom:
- phage
Quality
81.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Aliceevansviridae›
Moineauvirus›
Streptococcus_phage_vB_SthS_VA460
TaxID: 2069609
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-70
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.87 | 80.0 | 5.45e-01 | 100.0% | 30.8% |
| 1iqpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 57.0 | 4.22e-01 | 100.0% | 41.7% |
| 4ohxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 3.72e-01 | 96.9% | 50.4% |
| 1zzgA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 53.0 | 3.98e-01 | 100.0% | 40.8% |
| 2gn4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 49.0 | 3.43e-01 | 98.4% | 24.8% |
| 1ivyB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 50.0 | 3.10e-01 | 100.0% | 83.3% |
| 1dbqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 4.06e-01 | 96.9% | 74.6% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 45.0 | 3.04e-01 | 100.0% | 20.2% |
| 3oziB00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.58 | 49.0 | 3.75e-01 | 100.0% | 55.4% |
| 5bykA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 48.0 | 3.29e-01 | 98.4% | 76.4% |
| 6ecpB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.57 | 45.0 | 3.54e-01 | 89.1% | 68.3% |
| 1reqB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.57 | 48.0 | 3.82e-01 | 100.0% | 45.3% |
| 4ywhA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 47.0 | 3.70e-01 | 96.9% | 71.0% |
| 3jvdB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 48.0 | 3.93e-01 | 98.4% | 73.8% |
| 2d5cA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.56 | 45.0 | 3.85e-01 | 93.8% | 87.6% |
| 4e5vB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.54 | 44.0 | 3.05e-01 | 100.0% | 60.9% |
| 3rh0A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 44.0 | 3.59e-01 | 95.3% | 51.6% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 46.0 | 3.26e-01 | 98.4% | 68.3% |
| 1edzA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.53 | 43.0 | 3.50e-01 | 93.8% | 67.9% |
| 2wc1A00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 44.0 | 3.34e-01 | 100.0% | 70.3% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 43.0 | 3.39e-01 | 100.0% | 42.3% |
| 4p3yB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 3.18e-01 | 95.3% | 64.1% |
| 4rxlA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 43.0 | 3.60e-01 | 95.3% | 99.1% |
| 4qbaA00 | 3.40.190.290 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.51 | 42.0 | 3.01e-01 | 95.3% | 38.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2132278 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.91 | 85.0 | 5.59e-01 | 100.0% | 28.2% |
| 3164472 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.89 | 82.0 | 5.97e-01 | 100.0% | 40.0% |
| 3964961 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.88 | 80.0 | 5.47e-01 | 100.0% | 30.5% |
| 1187396 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.87 | 80.0 | 5.31e-01 | 100.0% | 27.6% |
| 3986759 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.85 | 77.0 | 5.23e-01 | 100.0% | 29.8% |
| 3515959 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.70 | 60.0 | 4.79e-01 | 100.0% | 47.7% |
| 4576763 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.67 | 55.0 | 3.61e-01 | 93.8% | 39.3% |
| 5060796 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.65 | 54.0 | 4.15e-01 | 100.0% | 38.4% |
| 5067855 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.65 | 54.0 | 4.07e-01 | 100.0% | 36.3% |
| 4219362 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.65 | 53.0 | 4.02e-01 | 93.8% | 67.1% |
| 4039050 | 2007.1.3.40 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L | 0.65 | 54.0 | 3.86e-01 | 93.8% | 57.5% |
| 3987969 | 4.1.1.392 ↗ | beta barrels › SH3 › SH3 › SH3 › Exonuc_VII_L | 0.65 | 53.0 | 3.88e-01 | 93.8% | 60.5% |
| 4943316 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 56.0 | 3.97e-01 | 100.0% | 43.3% |
| 4209330 | 2007.1.2.29 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Exonuc_VII_L | 0.64 | 53.0 | 3.83e-01 | 93.8% | 60.0% |
| 4477251 | 2007.1.9.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L | 0.63 | 51.0 | 3.37e-01 | 93.8% | 37.1% |
| 4098217 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.63 | 52.0 | 3.85e-01 | 95.3% | 63.2% |
| 3603650 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.62 | 53.0 | 3.71e-01 | 100.0% | 69.1% |
| 3839845 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.60 | 49.0 | 3.30e-01 | 95.3% | 44.4% |
| 4364276 | 2007.1.9.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › Exonuc_VII_L | 0.59 | 48.0 | 3.60e-01 | 95.3% | 64.9% |
| 3810016 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.58 | 49.0 | 3.91e-01 | 100.0% | 57.9% |
| 5001906 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.57 | 48.0 | 3.42e-01 | 100.0% | 31.6% |
| 3191747 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.57 | 48.0 | 3.34e-01 | 100.0% | 37.6% |
| 2602554 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.57 | 41.0 | 3.54e-01 | 96.9% | 45.2% |
| 3687404 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.56 | 46.0 | 3.33e-01 | 96.9% | 76.2% |
| 5041225 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.56 | 46.0 | 3.85e-01 | 100.0% | 50.4% |
| 4667857 | 2007.1.6.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N | 0.55 | 44.0 | 3.90e-01 | 92.2% | 100.0% |
| 5016401 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.55 | 45.0 | 2.81e-01 | 100.0% | 60.4% |
| 2771089 | 2007.1.6.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N | 0.54 | 44.0 | 3.88e-01 | 95.3% | 97.1% |
| 3287064 | 7574.1.1.0 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) | 0.54 | 43.0 | 3.06e-01 | 96.9% | 66.5% |
| 4397030 | 2007.1.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race | 0.54 | 43.0 | 3.54e-01 | 95.3% | 58.5% |
| 3975367 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.53 | 42.0 | 2.81e-01 | 93.8% | 35.6% |
| 3782271 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.53 | 43.0 | 3.05e-01 | 100.0% | 73.5% |
| 3632130 | 7516.1.1.67 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Gly_transf_sug | 0.52 | 44.0 | 2.95e-01 | 100.0% | 88.7% |
| 3261391 | 2003.1.10.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › PF27100 | 0.51 | 39.0 | 3.57e-01 | 92.2% | 90.0% |
| 3166823 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.51 | 40.0 | 3.46e-01 | 90.6% | 85.5% |
D2
medium
residues 71-120
Domain cluster:
representative