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MG711460.1__AUV61558.1__X__00046
Bact-VirMG711460.1__AUV61558.1__X__00046
Identity
- Accession:
- MG711460 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Taxonomy
TaxID: 2070185
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 70-177
Domain cluster:
rep: LSDeep1_scaffold_42_prodigal-single.1__X__X__00117__D105-220
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fqnC00 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.61 | 42.0 | 4.65e-01 | 91.7% | 91.8% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 42.0 | 4.23e-01 | 71.3% | 85.2% |
| 2id1A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 41.0 | 4.24e-01 | 70.4% | 88.5% |
| 2r75102 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.53 | 34.0 | 3.44e-01 | 86.1% | 62.7% |
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.52 | 43.0 | 2.71e-01 | 91.7% | 34.2% |
| 3a43A01 | 3.30.2320.50 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.52 | 33.0 | 3.68e-01 | 83.3% | 84.8% |
| 5e37A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 28.0 | 3.13e-01 | 70.4% | 68.6% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.50 | 39.0 | 2.89e-01 | 82.4% | 95.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964966 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.80 | 72.0 | 6.67e-01 | 96.3% | 91.9% |
| 3978327 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.79 | 70.0 | 6.77e-01 | 95.4% | 89.2% |
| 3977563 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.78 | 70.0 | 6.53e-01 | 95.4% | 80.0% |
| 5003241 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.78 | 69.0 | 6.76e-01 | 93.5% | 88.7% |
| 4967501 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.70 | 48.0 | 4.69e-01 | 70.4% | 64.2% |
| 5004556 | 327.20.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 | 0.68 | 53.0 | 5.54e-01 | 82.4% | 100.0% |
| 4472636 | 327.18.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › DNA_pol3_a_NI | 0.64 | 41.0 | 4.50e-01 | 94.4% | 81.2% |
| 4411957 | 327.10.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NI | 0.60 | 41.0 | 4.66e-01 | 77.8% | 95.0% |
| 4482129 | 223.1.1.84 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PHY+GAF | 0.59 | 45.0 | 3.52e-01 | 80.6% | 81.7% |
| 4951958 | 7584.1.1.11 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › PF27533 | 0.58 | 46.0 | 2.98e-01 | 83.3% | 47.7% |
| 3195037 | 4114.1.1.0 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like | 0.54 | 46.0 | 3.91e-01 | 94.4% | 91.4% |
| 5065713 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.54 | 47.0 | 3.41e-01 | 97.2% | 87.4% |
D2
medium
residues 1-69
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tafB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.61 | 44.0 | 4.39e-01 | 79.7% | 75.7% |
| 2iqcA00 | 1.25.40.490 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 39.0 | 2.93e-01 | 73.9% | 88.4% |
| 4dlqA02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 41.0 | 3.67e-01 | 84.1% | 64.2% |
| 3qxyA01 | 3.90.1410.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 | 0.51 | 40.0 | 2.66e-01 | 84.1% | 22.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.79 | 69.0 | 4.97e-01 | 95.7% | 35.3% |
| 4988108 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.79 | 69.0 | 5.97e-01 | 95.7% | 66.7% |
| 4957574 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.77 | 65.0 | 5.81e-01 | 95.7% | 67.4% |
| 3948958 | 1049.2.1.0 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain | 0.72 | 62.0 | 5.41e-01 | 97.1% | 66.7% |
| 3923659 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.71 | 55.0 | 4.93e-01 | 82.6% | 75.8% |
| 4938095 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.65 | 51.0 | 3.28e-01 | 85.5% | 28.7% |
| 5081021 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.65 | 50.0 | 4.00e-01 | 85.5% | 65.5% |
| 3846228 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.62 | 45.0 | 4.18e-01 | 79.7% | 60.0% |
| 3261541 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 45.0 | 3.80e-01 | 89.9% | 46.1% |
| 3574015 | 7579.1.1.58 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF829 | 0.61 | 45.0 | 3.09e-01 | 81.2% | 21.2% |
| 4589812 | 3922.1.1.294 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF2418 | 0.61 | 43.0 | 3.66e-01 | 72.5% | 47.3% |
| 3869802 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.61 | 47.0 | 3.30e-01 | 89.9% | 77.3% |
| 3198311 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.60 | 45.0 | 3.27e-01 | 85.5% | 27.3% |
| 3684484 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.60 | 51.0 | 3.78e-01 | 95.7% | 77.2% |
| 3635012 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 39.0 | 3.40e-01 | 76.8% | 47.5% |
| 3704161 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.06e-01 | 91.3% | 53.8% |
| 4020871 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.52 | 42.0 | 3.48e-01 | 92.8% | 83.8% |