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MG711463.1__AUV56496.1__X__00003

Bact-Vir

MG711463.1__AUV56496.1__X__00003

Identity

Accession:
MG711463 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 64-137
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 6.24e-01 87.8% 92.3%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.76 58.0 5.40e-01 82.4% 64.9%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 6.29e-01 93.2% 98.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 6.17e-01 83.8% 96.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 54.0 4.82e-01 77.0% 67.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.90e-01 91.9% 100.0%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 53.0 4.83e-01 77.0% 68.7%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 65.0 5.16e-01 97.3% 76.8%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 6.04e-01 82.4% 100.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.90e-01 98.6% 86.3%
6gy8A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.72 45.0 2.88e-01 98.6% 14.2%
1x4qA01 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.71 50.0 5.16e-01 75.7% 100.0%
3m03B00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 52.0 4.84e-01 81.1% 81.1%
2b9rA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 52.0 4.24e-01 81.1% 50.7%
4f7nB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 52.0 4.23e-01 81.1% 49.3%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 5.06e-01 89.2% 78.9%
1k87A02 1.10.2060.10 Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 0.66 43.0 3.74e-01 95.9% 45.0%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.66 52.0 4.38e-01 93.2% 47.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.89e-01 86.5% 78.7%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.65 40.0 3.57e-01 94.6% 43.8%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.63 41.0 4.05e-01 87.8% 61.7%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 39.0 3.94e-01 85.1% 64.4%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 40.0 3.53e-01 93.2% 45.0%
1ma1A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.61 38.0 4.01e-01 78.4% 71.9%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 41.0 4.29e-01 87.8% 77.6%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 43.0 3.95e-01 93.2% 58.5%
8e9gK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 41.0 3.87e-01 86.5% 59.3%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 40.0 3.87e-01 100.0% 61.2%
5wtzA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.59 49.0 3.57e-01 93.2% 35.2%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 39.0 3.65e-01 82.4% 54.3%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.59 39.0 3.42e-01 90.5% 44.0%
1b06A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.58 39.0 4.12e-01 79.7% 76.1%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.58 39.0 3.44e-01 70.3% 98.2%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.57 41.0 3.98e-01 100.0% 65.5%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 40.0 3.55e-01 93.2% 51.9%
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.56 45.0 3.39e-01 93.2% 72.8%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.54 39.0 3.58e-01 89.2% 57.0%
3i1aA03 1.20.58.840 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 41.0 3.57e-01 93.2% 52.6%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 38.0 3.42e-01 83.8% 54.5%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.53 42.0 3.91e-01 93.2% 67.7%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.53 45.0 3.88e-01 93.2% 84.8%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 41.0 3.32e-01 83.8% 72.7%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.52 44.0 3.98e-01 94.6% 86.4%
4i1mB01 1.20.120.1700 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 42.0 3.53e-01 97.3% 51.9%
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.51 38.0 3.69e-01 94.6% 69.7%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.51 41.0 3.93e-01 87.8% 80.5%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 41.0 4.09e-01 93.2% 85.7%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3793382 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.83 68.0 6.13e-01 87.8% 78.0%
3620214 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 68.0 6.23e-01 89.2% 82.1%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 62.0 5.59e-01 87.8% 67.0%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 62.0 5.90e-01 94.6% 74.4%
3972713 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 64.0 5.95e-01 97.3% 73.7%
3964397 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 60.0 5.35e-01 93.2% 60.0%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 60.0 5.55e-01 93.2% 67.0%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 64.0 6.20e-01 97.3% 83.5%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 59.0 6.19e-01 87.8% 96.9%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 63.0 6.35e-01 98.6% 93.3%
4034281 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 66.0 5.75e-01 97.3% 69.1%
4439853 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 60.0 6.19e-01 95.9% 92.9%
4336182 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 60.0 5.66e-01 87.8% 74.4%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 61.0 6.02e-01 95.9% 86.3%
3409412 101.1.10.19 alpha arrays › HTH › HTH › Cyclin-like › ORC6_2nd 0.74 56.0 5.17e-01 81.1% 76.8%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.73 61.0 6.27e-01 97.3% 98.6%
4146353 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.72 61.0 5.99e-01 97.3% 88.7%
4456068 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 60.0 5.46e-01 97.3% 69.0%
4233279 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.72 59.0 4.06e-01 93.2% 27.1%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.71 61.0 4.61e-01 97.3% 40.0%
3974736 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 57.0 5.49e-01 93.2% 76.5%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 58.0 5.84e-01 91.9% 92.0%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 58.0 5.76e-01 97.3% 88.7%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.76e-01 98.6% 93.3%
2817645 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.69 56.0 5.46e-01 97.3% 82.5%
4279016 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 58.0 5.66e-01 97.3% 86.3%
3816838 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 52.0 5.02e-01 83.8% 74.1%
3961841 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.67 54.0 5.50e-01 94.6% 95.7%
4238054 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.67 56.0 4.01e-01 100.0% 29.4%
4577850 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.67 56.0 5.18e-01 98.6% 72.7%
None 0.67 56.0 4.00e-01 100.0% 29.4%
3974118 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.20e-01 95.9% 77.8%
5056868 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 53.0 3.35e-01 89.2% 29.7%
1715098 101.1.2.236 alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD 0.65 49.0 4.74e-01 83.8% 75.0%
5008403 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.65 56.0 5.17e-01 95.9% 90.5%
4927047 632.19.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.63 40.0 4.04e-01 89.2% 64.0%
3509865 192.22.1.0 alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 0.62 39.0 3.44e-01 87.8% 42.7%
5066473 509.1.1.0 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.60 43.0 4.68e-01 90.5% 93.3%
4972352 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.60 42.0 3.55e-01 74.3% 69.2%
3171735 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.60 40.0 3.70e-01 85.1% 53.7%
3609611 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.59 45.0 3.64e-01 87.8% 43.7%
3263098 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.59 43.0 3.96e-01 94.6% 58.0%
4943663 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 43.0 3.37e-01 87.8% 36.8%
4477580 5086.1.1.118 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp 0.58 40.0 3.89e-01 87.8% 62.4%
3719307 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.57 42.0 3.15e-01 98.6% 29.5%
3556700 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.56 48.0 3.19e-01 98.6% 29.1%
3280272 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.55 47.0 3.05e-01 100.0% 21.2%
3396771 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.55 46.0 3.10e-01 98.6% 46.5%
4784166 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 41.0 4.24e-01 89.2% 85.7%
3484742 3922.1.1.197 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › BBS2_hp 0.53 39.0 3.71e-01 78.4% 65.9%
5041482 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.53 38.0 3.51e-01 93.2% 58.9%
4961508 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.50 43.0 4.35e-01 98.6% 93.3%
4962781 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.50 43.0 4.32e-01 93.2% 98.7%