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MG711463.1__AUV56523.1__X__00030
Bact-VirMG711463.1__AUV56523.1__X__00030
Identity
- Accession:
- MG711463 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Taxonomy
TaxID: 2070188
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-160
Domain cluster:
rep: HQ332139.1__AGF91556.1__PRRG_00047__00045__D4-148
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24083.2 best | Phage_ssDNA_bind | 34.6 | 1.80e-08 | 100.0% | 75.9% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wydA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 40.0 | 4.80e-01 | 94.2% | 81.4% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 40.0 | 5.15e-01 | 92.9% | 95.5% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 41.0 | 4.97e-01 | 94.8% | 85.3% |
| 3nemA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 40.0 | 4.82e-01 | 94.2% | 81.9% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 40.0 | 4.95e-01 | 94.2% | 99.0% |
| 1je5A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 56.0 | 5.31e-01 | 94.2% | 92.8% |
| 7tuvA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 32.0 | 4.08e-01 | 91.6% | 85.1% |
| 3a35A01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 32.0 | 4.08e-01 | 77.3% | 93.5% |
| 3aiiA02 | 2.40.240.100 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.56 | 24.0 | 3.76e-01 | 88.3% | 100.0% |
| 7pyvC02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 24.0 | 3.39e-01 | 88.3% | 88.6% |
| 3ke3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 30.0 | 3.47e-01 | 87.7% | 75.0% |
| 2gbmA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 27.0 | 3.46e-01 | 87.7% | 91.4% |
| 1wiaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 24.0 | 3.25e-01 | 88.3% | 90.0% |
| 1jkgB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.41e-01 | 71.4% | 91.7% |
| 2y3aA01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 29.0 | 2.38e-01 | 88.3% | 28.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388273 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 48.0 | 6.34e-01 | 91.6% | 100.0% |
| 5045187 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 41.0 | 4.70e-01 | 94.8% | 74.8% |
| 4609136 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 41.0 | 4.72e-01 | 94.8% | 75.7% |
| 4983577 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.72 | 41.0 | 4.86e-01 | 94.2% | 81.9% |
| 5031432 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.71 | 39.0 | 4.67e-01 | 94.2% | 78.1% |
| 5075389 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.70 | 39.0 | 4.55e-01 | 94.2% | 76.4% |
| 3889662 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 32.0 | 4.60e-01 | 90.9% | 100.0% |
| 4152821 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.69 | 41.0 | 4.69e-01 | 95.5% | 78.3% |
| 5004339 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 39.0 | 3.82e-01 | 92.2% | 51.2% |
| 3647740 | 2.1.1.69 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 | 0.67 | 37.0 | 3.80e-01 | 93.5% | 54.7% |
| 4968172 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 39.0 | 3.46e-01 | 92.2% | 39.5% |
| 4931472 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 38.0 | 3.50e-01 | 92.2% | 42.0% |
| 4111230 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 40.0 | 4.62e-01 | 94.2% | 81.7% |
| 4995609 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 38.0 | 3.97e-01 | 93.5% | 60.7% |
| 4264144 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.64 | 41.0 | 4.86e-01 | 94.2% | 94.3% |
| 3909994 | 2.3.1.1 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP | 0.63 | 39.0 | 3.80e-01 | 92.9% | 54.9% |
| 5072265 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 34.0 | 3.96e-01 | 94.2% | 78.2% |
| 3407575 | 243.1.1.40 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 | 0.58 | 41.0 | 3.68e-01 | 72.1% | 90.0% |
| 3391480 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 40.0 | 4.38e-01 | 90.9% | 92.0% |
| 4970425 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.55 | 24.0 | 3.56e-01 | 82.5% | 95.4% |
| 3859609 | 243.1.1.40 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 | 0.55 | 39.0 | 3.67e-01 | 73.4% | 93.7% |
| 3993952 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.53 | 26.0 | 2.86e-01 | 88.3% | 53.1% |
| 3397689 | 243.1.1.91 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 | 0.53 | 37.0 | 3.70e-01 | 71.4% | 88.1% |
| 1152673 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 30.0 | 3.49e-01 | 84.4% | 78.3% |
| 3229111 | 243.1.1.40 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 | 0.52 | 36.0 | 3.31e-01 | 71.4% | 89.8% |