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MG711464.1__AUV56611.1__X__00034

Bact-Vir

MG711464.1__AUV56611.1__X__00034

Identity

Accession:
MG711464 ↗
Kingdom:
phage

Quality

90.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lughvirus› Faecalibacterium_phage_FP_Lugh

TaxID: 2070184

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-34_51-131
PDB
Domain cluster: rep: NC_041892.1__YP_009596880.1__FDH09_gp16__00016__D2-43_60-141
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.73 68.0 6.24e-01 100.0% 91.2%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.69 63.0 5.49e-01 100.0% 80.2%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 54.0 5.36e-01 100.0% 79.8%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.64 56.0 4.97e-01 96.3% 84.6%
1zxqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 37.0 4.08e-01 84.4% 72.9%
3ue2A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 37.0 4.03e-01 82.6% 77.3%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 39.0 3.39e-01 72.5% 80.2%
4dj3B02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 40.0 3.62e-01 76.1% 81.8%
3lydA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 40.0 3.71e-01 77.1% 71.8%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 4.18e-01 81.7% 82.4%
1wa9A02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 40.0 3.45e-01 76.1% 77.4%
3o4oC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 4.13e-01 84.4% 80.0%
4r3aA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 38.0 3.23e-01 73.4% 62.5%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.53 47.0 3.95e-01 99.1% 96.9%
3f56A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.53 41.0 4.16e-01 89.0% 83.0%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 47.0 3.87e-01 100.0% 67.2%
4dj3B01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 38.0 3.79e-01 74.3% 93.7%
1w96C04 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 38.0 2.90e-01 78.0% 77.0%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 37.0 3.47e-01 76.1% 80.4%
5jqkA03 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.50 37.0 2.80e-01 78.9% 67.2%
5xgbA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 40.0 3.96e-01 85.3% 81.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929587 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 61.0 6.67e-01 95.4% 100.0%
3164699 1.1.13.33 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.70 63.0 6.20e-01 97.2% 98.3%
3096576 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 62.0 5.47e-01 100.0% 85.5%
4379249 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.68 55.0 5.32e-01 100.0% 76.0%
4995815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 61.0 5.87e-01 100.0% 88.0%
184718 1.1.13.16 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 0.64 56.0 4.97e-01 96.3% 84.6%
5049838 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.56 34.0 3.41e-01 97.2% 56.5%
3694265 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 44.0 4.16e-01 92.7% 69.6%
5055894 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.54 40.0 3.83e-01 76.1% 85.6%
4950287 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 35.0 3.43e-01 97.2% 60.8%
3668772 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.52 41.0 3.58e-01 84.4% 67.6%
5053529 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.52 38.0 3.73e-01 75.2% 93.0%
5019127 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.52 37.0 2.56e-01 75.2% 27.2%
2141257 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.50 40.0 3.87e-01 85.3% 76.8%
5045423 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.50 36.0 2.82e-01 75.2% 47.1%
D2 high residues 135-281
PDB
Domain cluster: rep: MH707434.1__AYJ75622.1__BSP19_060__00060__D144-264
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22768.2 best SPP1_Dit 31.8 1.90e-07 72.1% 97.9%