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MG711465.1__AUV56634.1__X__00015
Bact-VirMG711465.1__AUV56634.1__X__00015
Identity
- Accession:
- MG711465 ↗
- Kingdom:
- phage
Quality
86.4
mean pLDDT
Taxonomy
TaxID: 2070181
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-84
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.61 | 38.0 | 3.48e-01 | 72.3% | 47.7% |
| 1cfzA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.55 | 42.0 | 3.45e-01 | 83.1% | 88.9% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 40.0 | 3.59e-01 | 75.9% | 60.3% |
| 2nr9A00 | 1.20.1540.10 | Mainly Alpha › Up-down Bundle › Rhomboid-like fold › Rhomboid-like | 0.55 | 43.0 | 3.33e-01 | 84.3% | 76.6% |
| 2e1qC08 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.55 | 45.0 | 3.63e-01 | 91.6% | 89.4% |
| 3hrdA02 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.52 | 45.0 | 3.55e-01 | 95.2% | 64.5% |
| 2qm0A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 3.19e-01 | 96.4% | 50.0% |
| 3p5pA03 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 44.0 | 3.06e-01 | 100.0% | 85.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5073918 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.67 | 49.0 | 4.66e-01 | 75.9% | 71.6% |
| 3210225 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.66 | 50.0 | 4.45e-01 | 81.9% | 83.3% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.64 | 58.0 | 5.25e-01 | 100.0% | 75.5% |
| 3269193 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.62 | 51.0 | 4.31e-01 | 89.2% | 94.1% |
| 1144716 | 3806.1.1.1 ↗ | alpha complex topology › Carboxysomal shell beta carbonic anhydrase N-terminal domain › Carboxysomal shell beta carbonic anhydrase N-terminal domain › Carboxysomal shell beta carbonic anhydrase N-terminal domain › CsoSCA_N | 0.61 | 38.0 | 3.48e-01 | 72.3% | 47.7% |
| 3718434 | 376.1.1.6 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ | 0.60 | 35.0 | 3.16e-01 | 74.7% | 40.0% |
| 3976723 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.59 | 51.0 | 4.52e-01 | 100.0% | 64.8% |
| 3839237 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.58 | 50.0 | 4.03e-01 | 100.0% | 57.6% |
| 2997052 | 231.1.1.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_1 | 0.57 | 48.0 | 3.40e-01 | 91.6% | 96.1% |
| 3721920 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.55 | 48.0 | 3.30e-01 | 96.4% | 50.5% |
| 3491107 | 101.1.10.13 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF3452 | 0.54 | 41.0 | 3.02e-01 | 79.5% | 38.1% |
| 4945835 | 231.1.4.1 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Apc (acetophenone carboxylase) beta subunit middle domain › Hydantoinase_B | 0.52 | 42.0 | 3.63e-01 | 91.6% | 63.6% |
| 3520695 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.52 | 39.0 | 2.56e-01 | 81.9% | 84.9% |
| 3279619 | 2007.2.2.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › LMWPc | 0.50 | 43.0 | 3.67e-01 | 96.4% | 90.7% |
D2
high
residues 105-197
Domain cluster:
rep: ON526969.1__USH44526.1__SEA_CASSITA_72__00071__D13-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00436.32 best | SSB | 91.1 | 5.80e-26 | 100.0% | 93.3% |