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MG711466.1__AUV56789.1__X__00076
Bact-VirMG711466.1__AUV56789.1__X__00076
Identity
- Accession:
- MG711466 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 2070187
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-66
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.62 | 36.0 | 2.85e-01 | 72.9% | 26.9% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 32.0 | 2.40e-01 | 72.9% | 19.6% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 33.0 | 2.64e-01 | 71.2% | 25.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927417 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.73 | 48.0 | 3.14e-01 | 86.4% | 16.7% |
| 3698579 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.61 | 34.0 | 2.83e-01 | 76.3% | 28.2% |
| 3598725 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.61 | 50.0 | 3.62e-01 | 100.0% | 30.2% |
| 4991373 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.57 | 42.0 | 2.86e-01 | 89.8% | 21.0% |
| 3895743 | 3615.1.1.7 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 | 0.55 | 42.0 | 3.10e-01 | 88.1% | 84.2% |
| 3210081 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.55 | 46.0 | 2.85e-01 | 98.3% | 88.1% |
| 4380569 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.55 | 37.0 | 2.45e-01 | 86.4% | 15.0% |
| 3777109 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.51 | 42.0 | 2.61e-01 | 100.0% | 53.7% |
D2
high
residues 79-123
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 42.0 | 3.24e-01 | 100.0% | 33.7% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 3.19e-01 | 100.0% | 45.3% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 49.0 | 3.89e-01 | 100.0% | 59.8% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 4.18e-01 | 100.0% | 98.5% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 42.0 | 3.89e-01 | 100.0% | 87.7% |
| 3nqiA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.55 | 45.0 | 4.16e-01 | 100.0% | 92.3% |
| 2x8xX03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 41.0 | 3.44e-01 | 86.7% | 60.2% |
| 3f3fD01 | 2.20.25.500 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 39.0 | 3.79e-01 | 77.8% | 70.6% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 41.0 | 3.48e-01 | 100.0% | 88.9% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.54 | 45.0 | 3.63e-01 | 100.0% | 47.9% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 37.0 | 2.26e-01 | 77.8% | 99.2% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.36e-01 | 100.0% | 84.5% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 35.0 | 2.62e-01 | 73.3% | 27.1% |
| 1fi8C00 | 2.60.40.550 | Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin | 0.51 | 37.0 | 3.19e-01 | 80.0% | 66.7% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 2.75e-01 | 77.8% | 58.7% |
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.51 | 39.0 | 3.41e-01 | 100.0% | 82.6% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 35.0 | 2.30e-01 | 77.8% | 30.2% |
| 1ix2A00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 2.92e-01 | 77.8% | 68.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4388653 | 244.3.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › SufE | 0.60 | 40.0 | 2.89e-01 | 100.0% | 21.4% |
| 3710675 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.60 | 43.0 | 4.25e-01 | 100.0% | 72.9% |
| 4253984 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 44.0 | 4.61e-01 | 97.8% | 92.5% |
| 3998701 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.59 | 39.0 | 2.20e-01 | 100.0% | 5.3% |
| 3924850 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.57 | 45.0 | 3.50e-01 | 100.0% | 49.6% |
| 3716046 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.56 | 40.0 | 2.26e-01 | 100.0% | 6.8% |
| 5017032 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 45.0 | 3.06e-01 | 100.0% | 25.3% |
| 4000737 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.54 | 42.0 | 3.27e-01 | 100.0% | 47.7% |
| 3391411 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 37.0 | 3.86e-01 | 100.0% | 82.5% |
| 3533135 | 2492.1.1.36 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like | 0.52 | 41.0 | 2.77e-01 | 93.3% | 37.7% |
| 3891105 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 41.0 | 3.32e-01 | 97.8% | 97.1% |
| 1553361 | 2.1.1.5 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17,Ribosomal_S17_N | 0.52 | 42.0 | 3.58e-01 | 100.0% | 88.2% |
| 3998402 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.52 | 37.0 | 3.03e-01 | 77.8% | 63.8% |
| 3674657 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 37.0 | 2.24e-01 | 80.0% | 24.8% |
| 5026424 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 37.0 | 3.21e-01 | 95.6% | 76.8% |
| 4018119 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 42.0 | 2.47e-01 | 100.0% | 11.2% |
D3
medium
residues 242-291
Domain cluster:
representative