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MG721208.1__AUV57111.1__LM12_0017__00018

Bact-Vir

MG721208.1__AUV57111.1__LM12_0017__00018

Identity

Accession:
MG721208 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Kayvirus› Staphylococcus_phage_vB_SauM_LM12

TaxID: 2070179

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-37
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zbqA00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.77 59.0 3.49e-01 89.2% 32.1%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 47.0 3.23e-01 81.1% 22.8%
4af3A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 47.0 3.66e-01 81.1% 39.8%
1iieA00 1.10.870.10 Mainly Alpha › Orthogonal Bundle › HLA-dr Antigens Associated Invariant Chain; Chain A › MHC class II-associated invariant chain, trimerisation domain 0.63 44.0 3.56e-01 75.7% 36.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.74 51.0 2.98e-01 73.0% 48.5%
3881502 2004.1.1.118 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.73 50.0 2.96e-01 70.3% 92.4%
3208116 5.1.4.91 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VID27 0.70 50.0 2.84e-01 78.4% 94.1%
3589330 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.60 44.0 2.81e-01 81.1% 25.1%