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MG748548.1__AVZ45140.1__X__00057
Bact-VirMG748548.1__AVZ45140.1__X__00057
Identity
- Accession:
- MG748548 ↗
- Kingdom:
- phage
Quality
69.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mtkvariviridae›
Nieuwekanaalvirus›
Escherichia_phage_EP335
TaxID: 2070199
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-79
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dkmA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 41.0 | 3.73e-01 | 100.0% | 47.1% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 39.0 | 3.79e-01 | 100.0% | 56.3% |
| 2hgsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 41.0 | 3.65e-01 | 100.0% | 49.5% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.57 | 44.0 | 3.87e-01 | 84.2% | 93.2% |
| 1dynA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 37.0 | 3.26e-01 | 92.1% | 44.2% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 40.0 | 3.30e-01 | 100.0% | 39.5% |
| 1r0uA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 3.94e-01 | 100.0% | 93.0% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.55 | 47.0 | 4.63e-01 | 97.4% | 97.6% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.54 | 37.0 | 4.04e-01 | 100.0% | 90.0% |
| 3mk6B01 | 3.30.420.510 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.53 | 39.0 | 3.23e-01 | 81.6% | 90.8% |
| 3fruA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 41.0 | 3.23e-01 | 88.2% | 90.4% |
| 3zjbA00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.52 | 46.0 | 3.54e-01 | 98.7% | 43.0% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.51 | 42.0 | 3.78e-01 | 93.4% | 100.0% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.51 | 41.0 | 3.31e-01 | 90.8% | 86.3% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 42.0 | 2.84e-01 | 100.0% | 22.8% |
| 4gwmB03 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.50 | 45.0 | 3.52e-01 | 100.0% | 57.9% |
| 1g0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.58e-01 | 100.0% | 60.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3484366 | 284.1.2.1 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C | 0.66 | 57.0 | 5.29e-01 | 100.0% | 100.0% |
| 3939862 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.65 | 56.0 | 5.07e-01 | 100.0% | 89.1% |
| 3338688 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.62 | 47.0 | 5.07e-01 | 98.7% | 95.4% |
| 3929546 | 11.1.1.378 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 | 0.61 | 49.0 | 3.89e-01 | 100.0% | 43.2% |
| 3858827 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.60 | 39.0 | 3.76e-01 | 100.0% | 56.7% |
| 3617619 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 42.0 | 3.50e-01 | 100.0% | 43.0% |
| 3331566 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 46.0 | 3.99e-01 | 100.0% | 57.4% |
| 3520919 | 4004.1.1.6 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › Pacs-1 | 0.57 | 49.0 | 4.06e-01 | 100.0% | 90.2% |
| 3896234 | 11.1.1.795 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FANCAA | 0.57 | 46.0 | 3.57e-01 | 100.0% | 40.6% |
| 3615884 | 11.1.1.1189 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › XRCC1_N | 0.57 | 41.0 | 4.30e-01 | 98.7% | 85.5% |
| 3598544 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.57 | 48.0 | 3.80e-01 | 100.0% | 99.4% |
| 3941308 | 4004.1.1.0 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like | 0.56 | 48.0 | 3.57e-01 | 100.0% | 96.3% |
| 3990833 | 382.1.1.13 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Ly-6_related | 0.56 | 49.0 | 4.58e-01 | 100.0% | 90.5% |
| 4505312 | 230.2.1.2 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 | 0.55 | 41.0 | 3.87e-01 | 98.7% | 64.2% |
| 147056 | 3268.1.1.1 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI | 0.55 | 47.0 | 4.42e-01 | 100.0% | 84.0% |
| 5075171 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.55 | 38.0 | 3.53e-01 | 98.7% | 57.9% |
| 3357534 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 39.0 | 3.51e-01 | 100.0% | 54.3% |
| 4216863 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 4.13e-01 | 100.0% | 76.5% |
| 2124211 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.53 | 46.0 | 3.70e-01 | 100.0% | 91.9% |
| 2464208 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.53 | 46.0 | 3.67e-01 | 100.0% | 91.9% |
| 185186 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.53 | 45.0 | 3.67e-01 | 100.0% | 93.7% |
| 3919016 | 11.1.1.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N | 0.53 | 44.0 | 3.60e-01 | 100.0% | 49.0% |
| 3793097 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.53 | 45.0 | 3.90e-01 | 98.7% | 95.2% |
| 3613163 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.52 | 44.0 | 3.38e-01 | 100.0% | 41.5% |
| 3702051 | 1116.1.1.0 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain | 0.52 | 45.0 | 3.40e-01 | 100.0% | 42.5% |
| 3237575 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 46.0 | 3.14e-01 | 100.0% | 28.2% |
| 2124201 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.52 | 44.0 | 3.54e-01 | 97.4% | 100.0% |
| 3411043 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.52 | 45.0 | 3.63e-01 | 100.0% | 61.7% |
| 3411379 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.51 | 45.0 | 3.57e-01 | 100.0% | 63.4% |
| 3969420 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 45.0 | 3.34e-01 | 100.0% | 52.9% |
| 3390499 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 35.0 | 2.94e-01 | 72.4% | 89.3% |
| 4003316 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.51 | 45.0 | 3.84e-01 | 100.0% | 76.8% |
| 3898917 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 3.13e-01 | 98.7% | 44.3% |