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MG752970.1__AVH84994.1__RsoM2USA_65__00065

Bact-Vir

MG752970.1__AVH84994.1__RsoM2USA_65__00065

Identity

Accession:
MG752970 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ralstonia_phage_RsoM2USA

TaxID: 2070027

Cluster

View cluster (250 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-134_152-159
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q1zB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.81 51.0 5.91e-01 89.8% 87.1%
2rg4A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.79 71.0 6.10e-01 96.9% 90.7%
4j25F00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.79 71.0 6.19e-01 96.9% 84.0%
3dkqA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.76 69.0 6.05e-01 96.9% 88.5%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.76 53.0 5.77e-01 93.7% 85.8%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.76 54.0 4.88e-01 93.7% 55.4%
8h68A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.75 66.0 5.40e-01 93.7% 65.9%
4nplA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.75 65.0 5.44e-01 93.7% 76.1%
3kt4A02 3.60.130.20 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain 0.73 67.0 4.94e-01 99.2% 73.7%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.71 53.0 5.65e-01 90.6% 89.0%
3pl0B00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.71 63.0 5.02e-01 96.9% 79.0%
3thpA02 2.60.120.1520 Mainly Beta › Sandwich › Jelly Rolls › 0.71 51.0 4.79e-01 74.0% 67.1%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 53.0 5.52e-01 90.6% 84.2%
1y9qA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 48.0 5.57e-01 81.9% 96.8%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 48.0 5.46e-01 82.7% 94.7%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 44.0 5.19e-01 80.3% 96.6%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 52.0 5.32e-01 90.6% 84.4%
5fljA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 53.0 4.65e-01 94.5% 58.8%
2vqaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 51.0 4.52e-01 87.4% 58.2%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 55.0 5.12e-01 93.7% 71.7%
5wxuA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 54.0 4.95e-01 92.9% 68.5%
2vqaC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 53.0 4.68e-01 93.7% 61.0%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 52.0 5.25e-01 91.3% 85.6%
1fxzA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 53.0 4.81e-01 93.7% 67.7%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 51.0 4.48e-01 92.9% 58.9%
2qjvA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 52.0 4.94e-01 87.4% 80.7%
1uijB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 52.0 4.73e-01 93.7% 67.3%
5cadA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 52.0 4.49e-01 93.7% 58.5%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 52.0 4.61e-01 93.7% 63.5%
1j3qB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 55.0 4.86e-01 96.9% 78.7%
2e8yA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 37.0 4.24e-01 87.4% 85.6%
6l4cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 51.0 4.46e-01 92.9% 62.5%
2wanA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 37.0 4.22e-01 87.4% 87.5%
7jnfA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 41.0 3.82e-01 73.2% 97.0%
4psrA03 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.55 37.0 4.26e-01 92.9% 96.6%
2waoA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 41.0 4.37e-01 84.3% 90.1%
2futA03 2.60.40.2750 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 36.0 4.03e-01 82.7% 90.6%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.54 40.0 3.99e-01 78.0% 75.2%
3zo9B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 39.0 4.34e-01 92.9% 100.0%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 36.0 4.14e-01 78.7% 96.7%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 35.0 3.86e-01 93.7% 82.4%
3kl0D01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 40.0 4.30e-01 92.9% 97.2%
1j0hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 34.0 4.06e-01 93.7% 100.0%
2j1vA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 4.06e-01 85.0% 89.4%
2x5pA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 30.0 3.29e-01 78.7% 69.2%
1bliA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 35.0 4.00e-01 78.0% 100.0%
2qqkA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.51 39.0 4.11e-01 81.9% 98.3%
3kq4B04 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.51 37.0 3.94e-01 80.3% 86.5%
1uasA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 34.0 3.84e-01 79.5% 97.7%
4nzfD02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 33.0 3.76e-01 81.9% 94.4%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967555 10.12.1.53 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.81 74.0 6.13e-01 96.9% 77.6%
4278603 10.12.1.53 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.76 69.0 6.09e-01 97.6% 90.0%
None — 0.74 52.0 4.65e-01 93.7% 52.3%
3948934 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.74 50.0 5.53e-01 93.7% 87.0%
3293763 10.12.1.51 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 0.73 64.0 5.51e-01 93.7% 75.8%
4862637 10.12.1.29 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CDO_I 0.72 50.0 4.85e-01 93.7% 64.5%
5038285 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.70 63.0 5.60e-01 96.9% 81.1%
3282870 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.67 53.0 5.04e-01 93.7% 71.7%
3723454 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.67 54.0 5.01e-01 94.5% 67.5%
1877169 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.67 54.0 4.73e-01 94.5% 58.7%
2625944 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.64 53.0 4.89e-01 93.7% 68.7%
3367533 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.63 52.0 4.45e-01 93.7% 55.5%
3312880 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.63 51.0 4.41e-01 93.7% 55.9%
3834078 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.63 52.0 4.47e-01 96.1% 56.9%
4143381 10.12.1.22 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI 0.63 57.0 4.37e-01 96.9% 71.1%
3579524 10.12.1.15 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ARD 0.63 47.0 5.19e-01 92.9% 98.0%
None — 0.63 53.0 4.55e-01 96.1% 58.5%
3727573 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 51.0 4.32e-01 93.7% 53.7%
3651227 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 56.0 4.54e-01 96.9% 60.0%
5050931 10.12.1.34 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › GPI 0.62 55.0 4.78e-01 96.9% 74.7%
3467072 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 52.0 4.46e-01 96.1% 57.5%
3820862 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 51.0 4.32e-01 96.1% 54.6%
None — 0.61 55.0 4.81e-01 96.9% 76.2%
4439358 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 55.0 3.88e-01 96.9% 61.3%
4443179 10.12.1.34 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › GPI 0.61 55.0 4.65e-01 96.9% 71.7%
None — 0.61 55.0 3.82e-01 96.9% 59.5%
3732029 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.61 55.0 3.80e-01 96.9% 58.7%
None — 0.61 50.0 4.34e-01 96.1% 56.5%
3578114 10.12.1.21 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ERG2_Sigma1R 0.60 54.0 4.66e-01 96.9% 64.6%
3363456 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.60 38.0 3.89e-01 77.2% 64.8%
4298480 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.58 52.0 4.22e-01 96.9% 84.8%
4063161 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 35.0 3.98e-01 81.1% 83.2%
3957663 12.1.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C 0.55 39.0 4.17e-01 81.9% 88.6%
3933224 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.55 43.0 4.52e-01 83.5% 99.1%
4929726 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 40.0 4.39e-01 81.1% 100.0%
3388184 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 38.0 4.19e-01 83.5% 99.0%
3936887 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 41.0 4.23e-01 83.5% 98.3%
3928188 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 40.0 4.24e-01 83.5% 94.8%
3935016 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.51 40.0 3.88e-01 83.5% 75.2%
3225139 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.51 40.0 4.17e-01 81.9% 93.0%
4616725 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.51 40.0 4.16e-01 84.3% 97.4%
3236043 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.51 40.0 4.21e-01 85.0% 99.1%
3212710 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.51 41.0 4.19e-01 86.6% 99.2%
3214145 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.50 39.0 4.21e-01 83.5% 100.0%