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MG752970.1__AVH85013.1__RsoM2USA_84__00084

Bact-Vir

MG752970.1__AVH85013.1__RsoM2USA_84__00084

Identity

Accession:
MG752970 ↗
Kingdom:
phage

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ralstonia_phage_RsoM2USA

TaxID: 2070027

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-217
PDB
Domain cluster: rep: IMGVR_UViG_3300006225_000053-3300006225-Ga0082206_10217914__D28-177
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01171.27 best ATP_bind_3 127.5 7.10e-37 96.0% 99.5%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ni5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.89 82.0 7.74e-01 100.0% 82.8%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.88 81.0 7.87e-01 100.0% 87.6%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.85 78.0 6.61e-01 100.0% 63.4%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.80 47.0 5.67e-01 74.9% 85.9%
2c5sA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 60.0 5.96e-01 88.4% 80.3%
1vbkA03 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.75 48.0 5.77e-01 84.4% 95.5%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 54.0 6.02e-01 89.9% 93.1%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.72 49.0 5.77e-01 89.9% 97.8%
2derB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 60.0 6.03e-01 90.5% 94.1%
2yk4A01 3.30.370.20 Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › 0.69 28.0 4.22e-01 92.0% 89.0%
1q15D02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 56.0 5.03e-01 87.4% 75.0%
2pg3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 58.0 5.64e-01 93.5% 88.2%
4fflA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 33.0 4.60e-01 76.4% 98.9%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 56.0 5.71e-01 93.5% 92.9%
7ylrA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.61 35.0 4.53e-01 92.5% 100.0%
3o26A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 47.0 4.14e-01 82.4% 92.2%
6xl1A01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.60 44.0 4.96e-01 86.9% 98.1%
3b1fA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 40.0 4.23e-01 83.4% 76.0%
3zf8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 52.0 4.57e-01 96.0% 92.4%
2p11A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 38.0 4.33e-01 81.4% 91.7%
1foaA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 48.0 4.71e-01 89.9% 99.5%
1y1pA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 52.0 4.40e-01 100.0% 89.0%
1jhdA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 46.0 4.63e-01 87.4% 95.6%
5z2xA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 51.0 4.28e-01 100.0% 86.8%
7ec2A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 35.0 3.92e-01 81.9% 80.8%
5i45A00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 38.0 3.90e-01 81.9% 71.3%
3vpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 38.0 4.48e-01 76.4% 100.0%
6wjaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 4.32e-01 81.9% 89.7%
6nbrC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 50.0 4.30e-01 100.0% 80.9%
5u4nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 43.0 3.57e-01 82.4% 86.0%
3adoA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 39.0 4.05e-01 81.4% 79.0%
3h7aA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 4.13e-01 81.9% 87.7%
4id9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 4.16e-01 81.9% 81.5%
1orrC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 48.0 4.08e-01 100.0% 82.1%
1hyeA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 38.0 4.35e-01 76.4% 99.3%
1f14A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 39.0 3.99e-01 81.4% 77.6%
1bdbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 48.0 4.37e-01 100.0% 92.5%
2ixdA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.52 47.0 4.50e-01 98.5% 86.2%
3u9lA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 48.0 4.23e-01 99.5% 77.3%
5f5nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 47.0 4.18e-01 99.0% 89.3%
3kkjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 35.0 3.93e-01 82.4% 89.5%
2x4gA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 47.0 4.11e-01 100.0% 74.2%
2rh8A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 47.0 4.06e-01 100.0% 86.9%
5itwA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 47.0 4.34e-01 99.5% 82.4%
2jfzB01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 32.0 3.94e-01 85.4% 96.9%
3u49D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 47.0 4.38e-01 99.5% 99.2%
7jt8I02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.50 34.0 3.95e-01 71.9% 95.8%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.93 85.0 8.00e-01 100.0% 81.3%
None — 0.93 84.0 7.95e-01 100.0% 80.9%
4101393 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.91 85.0 7.85e-01 100.0% 79.2%
4101096 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.91 83.0 7.82e-01 100.0% 80.9%
4196387 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.91 84.0 7.93e-01 100.0% 82.6%
4432036 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.90 84.0 7.92e-01 100.0% 82.6%
4582525 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.90 83.0 7.79e-01 100.0% 80.4%
4286560 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.90 83.0 7.87e-01 100.0% 82.6%
4312317 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.90 87.0 8.07e-01 100.0% 82.9%
4614930 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 82.0 7.70e-01 100.0% 80.4%
4635446 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 82.0 7.76e-01 100.0% 82.2%
4328387 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 83.0 7.77e-01 100.0% 81.3%
4337374 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 83.0 7.72e-01 100.0% 80.9%
4678704 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 83.0 7.80e-01 100.0% 81.7%
4167294 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 84.0 7.62e-01 100.0% 77.2%
4275162 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 86.0 7.90e-01 100.0% 83.7%
4234668 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.89 82.0 7.74e-01 100.0% 82.6%
None — 0.88 83.0 7.66e-01 100.0% 80.0%
3741392 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.88 86.0 7.85e-01 100.0% 84.1%
4666944 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.88 84.0 8.07e-01 100.0% 88.6%
3354536 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.88 86.0 7.07e-01 100.0% 68.1%
146898 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.88 81.0 7.53e-01 100.0% 79.2%
4109217 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.88 82.0 7.60e-01 100.0% 80.4%
4885769 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 82.0 7.68e-01 100.0% 82.6%
3639091 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 84.0 7.41e-01 100.0% 80.2%
4573155 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 84.0 7.59e-01 99.5% 77.6%
3789499 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 84.0 7.51e-01 100.0% 80.0%
4219855 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 84.0 7.67e-01 100.0% 84.0%
4453324 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 84.0 7.74e-01 100.0% 81.6%
4147679 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 80.0 7.55e-01 100.0% 82.2%
4033318 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 81.0 7.79e-01 100.0% 87.3%
4052516 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.87 79.0 7.44e-01 100.0% 80.4%
5054895 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.86 80.0 7.53e-01 100.0% 81.7%
3604378 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.86 80.0 7.12e-01 100.0% 72.1%
4487256 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.86 78.0 7.55e-01 100.0% 87.0%
4396909 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.86 79.0 7.42e-01 100.0% 82.2%
5024294 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.85 82.0 7.30e-01 100.0% 77.4%
4295862 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.84 82.0 7.37e-01 100.0% 78.8%
4145378 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.84 81.0 7.65e-01 100.0% 87.4%
4656730 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.84 81.0 7.21e-01 100.0% 81.1%
5069002 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.84 79.0 6.96e-01 100.0% 71.9%
3255074 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.83 80.0 7.09e-01 100.0% 79.3%
4044690 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.83 78.0 7.21e-01 100.0% 79.6%
4994415 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.82 78.0 7.29e-01 100.0% 83.3%
4950959 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.77 64.0 6.71e-01 93.5% 93.9%
4969595 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.76 48.0 5.80e-01 85.4% 96.2%
9862 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.75 48.0 5.79e-01 84.4% 96.2%
5034136 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.75 71.0 5.97e-01 100.0% 88.9%
5042391 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.75 63.0 5.94e-01 99.5% 74.8%
4931977 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.75 63.0 6.09e-01 94.0% 79.5%
5056873 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.74 70.0 5.46e-01 100.0% 67.5%
5009345 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.74 62.0 6.03e-01 93.0% 80.4%
4943110 2005.1.1.111 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C 0.74 63.0 6.38e-01 90.5% 88.5%
5058414 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.74 70.0 5.77e-01 100.0% 86.2%
4557456 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.74 62.0 5.97e-01 94.0% 79.1%
4596498 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.73 62.0 6.03e-01 93.5% 80.5%
4046990 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.73 61.0 5.75e-01 94.0% 72.9%
5035048 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.73 61.0 6.12e-01 94.0% 85.9%
4172759 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.72 63.0 6.39e-01 95.5% 93.3%
4027081 2005.1.1.23 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.71 63.0 6.04e-01 92.0% 90.7%
4998101 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.71 62.0 6.05e-01 93.5% 83.2%
4609091 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.71 60.0 5.91e-01 94.0% 82.3%
None — 0.71 60.0 5.87e-01 94.5% 81.9%
3263813 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 46.0 5.61e-01 86.4% 99.2%
4933306 2005.1.1.20 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ThiI 0.71 60.0 5.87e-01 93.5% 83.3%
4132526 2005.1.1.23 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.71 62.0 6.00e-01 91.5% 93.2%
None — 0.71 58.0 6.17e-01 86.9% 96.6%
4511920 2005.1.1.47 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans 0.70 61.0 6.11e-01 92.0% 94.1%
4262903 2005.1.1.23 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA_Me_trans 0.70 61.0 5.93e-01 92.0% 87.7%
4192836 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.69 63.0 5.90e-01 95.0% 91.5%
None — 0.69 61.0 6.19e-01 91.5% 95.9%
4977476 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.69 60.0 5.29e-01 89.9% 79.3%
4983429 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.69 59.0 5.26e-01 89.9% 78.9%
None — 0.69 62.0 6.04e-01 95.5% 92.3%
4991573 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.69 62.0 5.97e-01 95.5% 89.8%
3281499 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.68 59.0 5.68e-01 90.5% 86.4%
3426498 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.68 56.0 5.07e-01 85.4% 95.0%
None — 0.68 60.0 5.99e-01 92.0% 95.0%
4037820 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.68 61.0 5.96e-01 95.0% 90.7%
4308342 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.67 61.0 6.03e-01 95.5% 93.8%
4443198 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.67 61.0 5.73e-01 95.5% 91.9%
None — 0.67 59.0 5.86e-01 92.0% 91.7%
None — 0.67 60.0 5.90e-01 95.5% 92.1%
None — 0.67 60.0 5.76e-01 95.0% 90.6%
None — 0.66 60.0 5.70e-01 95.5% 91.3%
4241012 2005.1.1.27 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC 0.65 59.0 5.72e-01 97.0% 92.0%
4305205 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.65 58.0 5.01e-01 93.0% 86.6%
None — 0.65 59.0 5.71e-01 97.5% 92.4%
4982617 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.63 54.0 5.29e-01 96.0% 82.2%
4931998 2005.1.1.16 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 0.63 54.0 5.14e-01 99.0% 78.1%
4946146 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.61 40.0 4.74e-01 80.4% 97.0%
5037153 7592.1.1.1 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Cas_NE0113 0.56 46.0 4.33e-01 86.4% 71.4%
3179682 2003.1.1.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.54 50.0 3.94e-01 100.0% 81.4%
4372235 2003.1.1.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.51 46.0 3.67e-01 99.0% 84.8%
D2 high residues 250-345
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wwhA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.68 51.0 4.37e-01 80.2% 62.7%
3d4eA02 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.63 34.0 3.74e-01 87.5% 62.8%
1i3pA00 2.60.250.10 Mainly Beta › Sandwich › Baculovirus p35 › Baculovirus p35 0.61 54.0 3.88e-01 96.9% 34.7%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 36.0 3.98e-01 77.1% 75.7%
4dolA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.56 49.0 4.26e-01 100.0% 70.5%
1fmjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 2.97e-01 83.3% 70.2%
1vi7A01 3.30.230.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain 0.54 43.0 3.88e-01 88.5% 73.3%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 40.0 4.00e-01 81.2% 83.2%
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 42.0 3.32e-01 85.4% 100.0%
3of4A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.52 36.0 2.89e-01 72.9% 50.2%
5frdA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 36.0 2.70e-01 74.0% 56.2%
3khnB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.51 38.0 3.27e-01 79.2% 83.4%
3u7vA02 2.60.220.20 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus 0.50 43.0 3.78e-01 94.8% 91.7%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.50 40.0 3.10e-01 86.5% 88.2%
1odmA00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.50 42.0 2.91e-01 90.6% 95.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4303875 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.70 54.0 5.60e-01 86.5% 85.6%
3901236 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.62 35.0 3.54e-01 76.0% 54.0%
3643150 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 38.0 4.02e-01 77.1% 70.6%
5054621 182.1.3.0 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX 0.60 42.0 3.93e-01 74.0% 67.2%
3365716 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 37.0 3.93e-01 75.0% 69.4%
4942586 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.59 47.0 4.48e-01 96.9% 73.6%
4389729 213.1.1.2 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N 0.55 48.0 3.94e-01 96.9% 71.1%
4584776 101.1.15.3 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C_fung 0.52 45.0 3.39e-01 100.0% 41.2%
3848474 256.1.1.1 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease 0.51 38.0 3.24e-01 78.1% 88.0%
5038401 210.1.3.3 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.51 40.0 2.95e-01 87.5% 49.8%
4556297 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.51 41.0 3.27e-01 88.5% 98.0%
3807674 331.3.1.28 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 0.51 37.0 2.86e-01 78.1% 69.8%
4127795 307.1.1.2 ↗ a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15 0.50 44.0 3.36e-01 97.9% 83.3%
4158980 217.1.1.2 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 0.50 43.0 3.45e-01 97.9% 47.9%