Back to structures

MG752970.1__AVH85019.1__RsoM2USA_90__00090

Bact-Vir

MG752970.1__AVH85019.1__RsoM2USA_90__00090

Identity

Accession:
MG752970 ↗
Kingdom:
phage

Quality

73.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 20-116
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ezgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.70 63.0 5.10e-01 100.0% 57.8%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 59.0 4.96e-01 94.8% 58.9%
7v3kA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 51.0 3.72e-01 91.8% 74.0%
4zi5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 54.0 4.06e-01 100.0% 76.6%
3m6iA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 46.0 4.08e-01 85.6% 90.8%
1vjnA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 50.0 3.99e-01 96.9% 62.4%
3cssA00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 48.0 3.57e-01 100.0% 68.6%
8ea4D01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 3.74e-01 88.7% 76.1%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039608 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.73 46.0 5.23e-01 74.2% 87.1%
None 0.71 61.0 4.42e-01 92.8% 36.5%
3249588 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.70 61.0 3.76e-01 94.8% 21.4%
1254943 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.70 63.0 5.10e-01 100.0% 57.8%
3975057 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.70 64.0 4.38e-01 100.0% 38.1%
4326931 207.1.1.386 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › NEL 0.70 64.0 3.87e-01 100.0% 20.2%
3324539 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.70 64.0 5.58e-01 99.0% 75.7%
3460860 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 63.0 5.00e-01 100.0% 60.0%
3345338 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 64.0 5.45e-01 100.0% 74.7%
3309702 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.69 64.0 3.90e-01 100.0% 25.4%
3350357 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.68 63.0 5.44e-01 100.0% 93.8%
3369011 207.1.1.55 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.68 62.0 3.80e-01 100.0% 21.9%
3466428 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.68 62.0 4.22e-01 99.0% 34.8%
None 0.67 62.0 3.93e-01 100.0% 27.7%
3804197 207.1.1.238 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 0.67 62.0 3.85e-01 100.0% 26.3%
3322398 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.67 61.0 4.60e-01 100.0% 57.4%
3429952 207.1.1.143 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 0.67 61.0 4.20e-01 100.0% 44.9%
3341670 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.67 60.0 3.85e-01 97.9% 26.6%
3802231 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.67 61.0 4.80e-01 100.0% 56.9%
3273802 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.66 61.0 4.58e-01 100.0% 59.4%
4652288 207.1.1.130 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.66 60.0 4.21e-01 100.0% 45.7%
3786316 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 58.0 4.96e-01 99.0% 66.2%
3679213 207.1.1.103 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.64 58.0 4.55e-01 100.0% 72.4%
3348430 2003.1.2.63 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 0.53 46.0 3.10e-01 99.0% 88.1%
D2 medium residues 117-249
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xwdC00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.80 74.0 5.99e-01 100.0% 61.2%
3o53A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.74 68.0 5.13e-01 100.0% 48.1%
4ezgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.74 68.0 6.07e-01 100.0% 73.5%
4gt6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.74 68.0 4.81e-01 99.2% 37.5%
4fd0A02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.72 66.0 5.04e-01 100.0% 45.0%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.70 60.0 5.69e-01 98.5% 77.8%
3mzwA03 3.80.20.20 Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain 0.67 59.0 5.43e-01 94.0% 94.0%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.65 58.0 5.17e-01 98.5% 96.9%
5lqdD01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 44.0 3.67e-01 94.7% 87.9%
5cz2C00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 31.0 3.03e-01 85.7% 53.3%
1vq2A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.50 41.0 3.77e-01 87.2% 83.2%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3831415 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.80 75.0 5.26e-01 100.0% 42.1%
3433918 207.1.1.97 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 0.78 73.0 5.99e-01 100.0% 68.7%
3449601 207.1.1.97 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 0.78 73.0 6.05e-01 100.0% 75.0%
3325301 207.1.1.143 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 0.78 73.0 4.52e-01 100.0% 20.4%
3464902 207.1.1.103 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.78 73.0 5.43e-01 100.0% 58.4%
3605461 207.1.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.78 73.0 5.19e-01 100.0% 43.8%
3380214 207.1.1.230 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 0.77 72.0 5.11e-01 100.0% 38.9%
4024819 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 71.0 5.38e-01 100.0% 50.8%
3706134 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.77 71.0 4.63e-01 100.0% 30.2%
3601522 207.1.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.76 71.0 4.35e-01 100.0% 33.0%
3441573 207.1.1.103 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 0.76 68.0 6.44e-01 95.5% 90.3%
3271623 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.76 69.0 4.94e-01 100.0% 35.1%
3369699 207.1.1.190 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_13 0.75 69.0 5.38e-01 98.5% 50.4%
3662350 207.1.1.102 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.75 69.0 5.86e-01 100.0% 76.7%
3781297 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.75 70.0 5.03e-01 100.0% 40.8%
3610166 207.1.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 0.75 69.0 4.63e-01 100.0% 33.9%
3320526 207.1.1.97 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 0.75 65.0 5.98e-01 91.7% 89.7%
4877532 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.75 69.0 4.70e-01 100.0% 32.0%
3362716 207.1.1.97 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 0.74 69.0 5.63e-01 100.0% 64.0%
3607045 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 69.0 5.08e-01 100.0% 50.3%
3598589 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 69.0 5.32e-01 100.0% 60.4%
3461422 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 69.0 4.36e-01 100.0% 29.3%
3447202 207.1.1.99 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 0.74 69.0 5.43e-01 100.0% 64.1%
3783735 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 69.0 4.82e-01 100.0% 38.5%
None 0.74 68.0 4.78e-01 100.0% 46.8%
3785056 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 69.0 4.83e-01 100.0% 44.2%
3693613 207.1.1.79 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.74 68.0 4.41e-01 100.0% 32.8%
3848865 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.74 67.0 5.76e-01 100.0% 78.6%
3819923 207.1.1.102 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 0.73 67.0 5.26e-01 100.0% 57.8%
3439545 207.1.1.99 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 0.73 68.0 4.60e-01 100.0% 36.9%
3784447 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.73 68.0 5.08e-01 100.0% 47.1%
3224770 207.1.1.55 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.73 67.0 4.65e-01 100.0% 41.9%
3819589 207.1.1.134 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 0.72 66.0 4.69e-01 100.0% 46.0%
3907773 207.1.1.307 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885, PF29594 0.72 65.0 4.78e-01 100.0% 50.4%
None 0.71 66.0 5.26e-01 100.0% 58.4%
5006686 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.71 56.0 5.98e-01 99.2% 94.8%
3249063 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.71 65.0 5.24e-01 100.0% 64.4%
158287 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.71 60.0 5.64e-01 98.5% 75.0%
3568316 207.1.1.134 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 0.70 64.0 4.55e-01 100.0% 44.2%
3927352 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.68 62.0 5.03e-01 100.0% 64.4%
3885302 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 61.0 4.89e-01 98.5% 96.4%
3275074 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.67 61.0 5.88e-01 100.0% 93.3%
3456749 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.66 59.0 4.71e-01 100.0% 83.0%
3370442 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 56.0 5.86e-01 94.7% 100.0%
3390129 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 59.0 4.83e-01 100.0% 65.0%
3211332 207.1.1.5 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain 0.64 55.0 5.51e-01 93.2% 99.3%
3456290 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.57 31.0 4.04e-01 93.2% 100.0%
4956251 7573.1.1.2 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N 0.53 44.0 4.28e-01 90.2% 86.7%