←Back to structures
MG752970.1__AVH85036.1__RsoM2USA_107__00107
Bact-VirMG752970.1__AVH85036.1__RsoM2USA_107__00107
Identity
- Accession:
- MG752970 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-54
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 44.0 | 4.06e-01 | 95.1% | 64.4% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.55 | 39.0 | 3.18e-01 | 80.5% | 63.6% |
| 1o7fA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 2.83e-01 | 85.4% | 70.3% |
| 3ckjA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 40.0 | 2.45e-01 | 82.9% | 72.7% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 37.0 | 2.89e-01 | 75.6% | 38.1% |
| 7kggC02 | 3.30.2090.10 | Alpha Beta › 2-Layer Sandwich › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | 0.53 | 34.0 | 2.74e-01 | 70.7% | 27.2% |
| 4j6fA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.52 | 36.0 | 2.57e-01 | 92.7% | 50.7% |
| 1svvB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 36.0 | 2.93e-01 | 75.6% | 54.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4824429 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.66 | 37.0 | 2.83e-01 | 100.0% | 22.0% |
| 4314239 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.60 | 31.0 | 2.93e-01 | 100.0% | 40.0% |
| 5027341 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.58 | 45.0 | 3.16e-01 | 92.7% | 24.4% |
| 3734132 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.56 | 36.0 | 2.13e-01 | 100.0% | 8.6% |
| 1033457 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.56 | 44.0 | 4.05e-01 | 95.1% | 65.5% |
| 3744674 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.56 | 41.0 | 3.15e-01 | 100.0% | 36.4% |
| 3966245 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.55 | 38.0 | 3.28e-01 | 100.0% | 46.2% |
| 4489860 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.55 | 34.0 | 2.34e-01 | 82.9% | 15.8% |
| 4945483 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.54 | 43.0 | 2.58e-01 | 100.0% | 12.2% |
| 2755218 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 35.0 | 2.28e-01 | 97.6% | 13.6% |
| 4090235 | 1189.1.1.2 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG_B | 0.52 | 40.0 | 2.37e-01 | 82.9% | 89.0% |
| 4963760 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 34.0 | 2.76e-01 | 70.7% | 32.6% |
| 3316490 | 108.1.1.20 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like | 0.51 | 34.0 | 2.65e-01 | 100.0% | 26.7% |
| 4026519 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.51 | 29.0 | 2.20e-01 | 100.0% | 17.8% |
| 3656669 | 207.1.1.245 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, LRR_At5g56370, DUF7885 | 0.51 | 35.0 | 1.97e-01 | 75.6% | 16.3% |