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MG752970.1__AVH85042.1__RsoM2USA_114__00114

Bact-Vir

MG752970.1__AVH85042.1__RsoM2USA_114__00114

Identity

Accession:
MG752970 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ralstonia_phage_RsoM2USA

TaxID: 2070027

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-113
PDB
Domain cluster: rep: MW291021.1__QPL14492.1__SEA_EHYELIMAYOE_177__00175__D3-97
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6n90A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.83 63.0 6.98e-01 81.8% 98.9%
4ml0B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.82 64.0 6.99e-01 88.2% 97.8%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.82 61.0 6.77e-01 83.6% 96.6%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.82 60.0 6.67e-01 81.8% 96.6%
5cw7B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.75 60.0 6.47e-01 94.5% 97.9%
4mcxF00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.75 56.0 6.11e-01 78.2% 98.9%
2otrA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.72 54.0 5.94e-01 81.8% 96.7%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.63 42.0 4.78e-01 80.0% 96.1%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.58 43.0 4.59e-01 86.4% 92.4%
3v3sA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 49.0 3.78e-01 100.0% 88.1%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 33.0 3.57e-01 84.5% 72.7%
1gwyA00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.54 40.0 3.47e-01 78.2% 82.9%
2xrnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 48.0 4.15e-01 100.0% 88.7%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 39.0 2.78e-01 74.5% 34.2%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.86e-01 79.1% 34.0%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 39.0 2.69e-01 75.5% 32.4%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.53 37.0 3.16e-01 70.9% 61.5%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 29.0 2.87e-01 70.0% 47.1%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 39.0 2.75e-01 76.4% 33.7%
4bq6F00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.53 38.0 3.50e-01 76.4% 83.2%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.53 39.0 3.55e-01 77.3% 95.2%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 38.0 2.75e-01 76.4% 34.3%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 40.0 3.26e-01 85.5% 93.3%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032565 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.87 63.0 7.10e-01 80.0% 95.3%
2807914 4312.1.1.6 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin 0.85 62.0 6.88e-01 80.9% 93.3%
2549544 4312.1.1.6 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin 0.83 63.0 6.98e-01 81.8% 98.9%
1297412 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.83 64.0 6.96e-01 88.2% 96.7%
2629016 4312.1.1.6 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin 0.82 60.0 6.67e-01 81.8% 96.6%
5062498 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.81 59.0 6.67e-01 81.8% 97.6%
3166135 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.81 65.0 6.96e-01 100.0% 96.8%
5031302 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.81 63.0 6.51e-01 81.8% 98.1%
5028034 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.80 61.0 6.72e-01 98.2% 97.8%
3165472 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.79 60.0 6.41e-01 78.2% 92.6%
5027871 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.79 62.0 6.67e-01 91.8% 96.8%
3948814 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.79 66.0 6.80e-01 100.0% 94.3%
4948982 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.78 59.0 6.41e-01 88.2% 96.7%
4937283 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.77 61.0 6.57e-01 90.9% 96.8%
5016951 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.77 62.0 6.62e-01 96.4% 97.9%
1877168 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.77 60.0 6.51e-01 81.8% 96.7%
4937462 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.77 61.0 6.52e-01 91.8% 96.8%
5080833 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.77 66.0 6.79e-01 100.0% 97.1%
4646165 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.75 57.0 6.28e-01 82.7% 96.7%
4950997 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.75 60.0 6.20e-01 84.5% 97.1%
3278065 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.75 64.0 6.47e-01 100.0% 92.7%
4460363 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.75 66.0 6.56e-01 100.0% 92.2%
3944846 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.75 66.0 6.58e-01 100.0% 92.2%
4958266 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.74 63.0 6.48e-01 90.0% 100.0%
3282412 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.74 68.0 6.57e-01 100.0% 89.4%
166546 4312.1.1.10 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.72 54.0 5.94e-01 81.8% 96.7%
4941339 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.71 61.0 6.19e-01 92.7% 98.2%
3810856 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.70 61.0 5.71e-01 100.0% 76.3%
1124757 4312.1.1.2 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin 0.70 56.0 5.99e-01 84.5% 98.9%
3956000 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.68 43.0 5.22e-01 80.9% 100.0%
5021930 4312.1.1.22 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 0.67 49.0 5.17e-01 85.5% 84.0%
3287567 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.65 45.0 4.96e-01 84.5% 87.8%
4998648 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.63 45.0 4.87e-01 79.1% 87.4%
1146563 4312.1.1.1 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin 0.58 38.0 4.42e-01 84.5% 97.4%
4255390 223.1.1.5 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.57 51.0 4.44e-01 100.0% 78.2%
3629205 5.1.4.147 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.57 41.0 2.92e-01 76.4% 34.2%
3788776 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.56 39.0 2.78e-01 71.8% 36.4%
3788344 5.1.4.337 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_CDC20-Fz 0.56 41.0 2.88e-01 77.3% 30.3%
3487683 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.84e-01 83.6% 27.6%
3239417 234.3.1.0 ↗ a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.55 44.0 4.19e-01 87.3% 97.8%
3306198 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 40.0 2.79e-01 75.5% 32.5%
3298472 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 39.0 3.41e-01 74.5% 69.4%
1649977 101.15.1.2 ↗ alpha arrays › HTH › LysM domain › LysM domain › OapA 0.54 33.0 3.60e-01 86.4% 73.3%
3266581 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 39.0 2.62e-01 76.4% 32.4%
3457412 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 39.0 2.92e-01 76.4% 44.8%
3698253 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.53 38.0 2.55e-01 76.4% 37.9%
3416138 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 39.0 2.72e-01 78.2% 26.2%
4438074 223.1.1.5 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.53 46.0 4.27e-01 100.0% 80.7%
4243468 5.1.4.262 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.52 39.0 2.64e-01 79.1% 54.9%
3495264 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 43.0 3.70e-01 92.7% 55.6%
5074664 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 3.68e-01 90.9% 64.3%
3618412 5.1.11.24 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_Aladin 0.51 44.0 2.94e-01 93.6% 97.5%
3608173 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 37.0 2.61e-01 76.4% 29.6%
4621792 7558.1.1.14 ↗ a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › PF27464 0.51 45.0 3.72e-01 100.0% 86.8%
1512998 3953.1.1.1 ↗ a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N 0.50 32.0 3.55e-01 95.5% 82.4%
3801008 5.1.4.420 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Aladin 0.50 45.0 3.00e-01 100.0% 98.7%