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MG752970.1__AVH85158.1__RsoM2USA_230__00230
Bact-VirMG752970.1__AVH85158.1__RsoM2USA_230__00230
Identity
- Accession:
- MG752970 ↗
- Kingdom:
- phage
Quality
74.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-87
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 5.07e-01 | 100.0% | 86.2% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 48.0 | 5.28e-01 | 98.8% | 95.2% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 48.0 | 5.16e-01 | 100.0% | 88.4% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 42.0 | 4.87e-01 | 83.7% | 88.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 48.0 | 5.25e-01 | 100.0% | 95.2% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 50.0 | 5.02e-01 | 98.8% | 78.3% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 46.0 | 5.13e-01 | 100.0% | 96.8% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 49.0 | 5.34e-01 | 96.2% | 97.0% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 49.0 | 5.03e-01 | 100.0% | 85.3% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 48.0 | 4.99e-01 | 98.8% | 85.3% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.87e-01 | 100.0% | 90.9% |
| 2xgjA05 | 2.40.30.300 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 50.0 | 4.23e-01 | 86.3% | 73.1% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 46.0 | 4.84e-01 | 100.0% | 91.4% |
| 3vygD00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 56.0 | 4.81e-01 | 100.0% | 77.3% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 40.0 | 4.39e-01 | 87.5% | 95.3% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 38.0 | 4.09e-01 | 75.0% | 81.2% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 47.0 | 3.15e-01 | 98.8% | 60.6% |
| 3ue3A02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 43.0 | 3.61e-01 | 86.3% | 50.7% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.55 | 37.0 | 2.89e-01 | 86.3% | 29.8% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 38.0 | 3.70e-01 | 100.0% | 64.8% |
| 2mn5A00 | 3.30.30.140 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.54 | 34.0 | 3.81e-01 | 75.0% | 89.3% |
| 5b3pA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.53 | 39.0 | 3.32e-01 | 78.8% | 52.2% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.53 | 47.0 | 3.69e-01 | 97.5% | 74.4% |
| 5inhA04 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.53 | 43.0 | 3.02e-01 | 92.5% | 65.2% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.53 | 40.0 | 3.47e-01 | 83.7% | 82.6% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.53 | 41.0 | 3.48e-01 | 85.0% | 78.7% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 44.0 | 4.03e-01 | 97.5% | 68.8% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.75e-01 | 91.3% | 54.0% |
| 2gexA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.67e-01 | 97.5% | 80.1% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 2.77e-01 | 95.0% | 37.9% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 29.0 | 2.80e-01 | 91.3% | 45.2% |
| 3k3dA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 3.18e-01 | 80.0% | 47.6% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.29e-01 | 100.0% | 59.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4068131 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.66 | 47.0 | 4.39e-01 | 100.0% | 62.1% |
| 3600929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 55.0 | 5.39e-01 | 100.0% | 85.9% |
| 4026785 | 4.1.1.279 ↗ | beta barrels › SH3 › SH3 › SH3 › IQ | 0.63 | 51.0 | 4.54e-01 | 85.0% | 65.5% |
| 3181439 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 58.0 | 5.21e-01 | 100.0% | 90.7% |
| 3703958 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.62 | 56.0 | 3.75e-01 | 100.0% | 36.4% |
| 4218488 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.62 | 46.0 | 4.66e-01 | 87.5% | 78.8% |
| 3482360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 56.0 | 5.42e-01 | 98.8% | 93.3% |
| 3622641 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.60 | 52.0 | 4.49e-01 | 93.8% | 72.5% |
| 3573739 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.59 | 51.0 | 4.47e-01 | 92.5% | 73.0% |
| 3483566 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 51.0 | 4.64e-01 | 92.5% | 70.5% |
| 4012249 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.59 | 38.0 | 2.68e-01 | 75.0% | 21.6% |
| 3709057 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 3.85e-01 | 98.8% | 57.1% |
| 5057638 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.57 | 40.0 | 3.30e-01 | 73.8% | 83.3% |
| 3782925 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 43.0 | 4.12e-01 | 86.3% | 68.4% |
| 4529160 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 50.0 | 4.62e-01 | 100.0% | 86.7% |
| 3257650 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.23e-01 | 95.0% | 78.8% |
| 3418938 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.56 | 40.0 | 3.16e-01 | 76.2% | 52.0% |
| 3677000 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 41.0 | 3.35e-01 | 78.8% | 88.7% |
| 3770801 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.55 | 49.0 | 4.64e-01 | 100.0% | 85.3% |
| 4283649 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.54 | 48.0 | 4.25e-01 | 100.0% | 90.7% |
| 3709897 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 37.0 | 3.50e-01 | 71.2% | 58.9% |
| 3344144 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 38.0 | 3.78e-01 | 73.8% | 73.8% |
| 3503000 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 46.0 | 4.56e-01 | 96.2% | 94.1% |
| 3940446 | 804.1.1.3 ↗ | a+b four layers › Hypothetical protein YwqG › Hypothetical protein YwqG › Hypothetical protein YwqG › PDCD2_C, PF30657 | 0.52 | 42.0 | 3.20e-01 | 95.0% | 89.2% |
| 3221209 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 45.0 | 2.96e-01 | 96.2% | 30.9% |
| 3170863 | 5.1.3.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Sortilin-Vps10 | 0.51 | 44.0 | 3.00e-01 | 100.0% | 36.5% |
| 4017204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.51 | 44.0 | 4.13e-01 | 98.8% | 87.0% |
| 3608101 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 37.0 | 3.54e-01 | 78.8% | 80.0% |
| 3928221 | 4.1.1.310 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26050 | 0.50 | 45.0 | 3.75e-01 | 100.0% | 97.1% |
| 3210606 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.50 | 41.0 | 3.60e-01 | 91.3% | 74.4% |