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MG752970.1__AVH85183.1__RsoM2USA_255__00255
Bact-VirMG752970.1__AVH85183.1__RsoM2USA_255__00255
Identity
- Accession:
- MG752970 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-73_97-137_195-238
Domain cluster:
rep: MG752970.1__AVH85333.1__RsoM2USA_405__00405__D14-75_98-125_256-291
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mdpA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 4.28e-01 | 97.9% | 93.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010839 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.53 | 38.0 | 2.52e-01 | 74.3% | 59.5% |
| 139274 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.51 | 41.0 | 4.27e-01 | 97.9% | 92.4% |
D2
medium
residues 74-96_138-194
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.72 | 49.0 | 4.76e-01 | 71.2% | 96.7% |
| 1af7A01 | 1.10.155.10 | Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.67 | 53.0 | 5.31e-01 | 88.7% | 85.0% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 30.0 | 3.33e-01 | 90.0% | 55.4% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 38.0 | 4.18e-01 | 71.2% | 75.4% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.62 | 42.0 | 3.80e-01 | 71.2% | 54.1% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 37.0 | 3.74e-01 | 71.2% | 62.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 38.0 | 4.28e-01 | 71.2% | 86.7% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.59 | 47.0 | 4.18e-01 | 97.5% | 60.2% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 37.0 | 4.24e-01 | 71.2% | 88.1% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.58 | 36.0 | 4.02e-01 | 71.2% | 80.3% |
| 1x9fA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 43.0 | 3.62e-01 | 81.2% | 81.6% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.58 | 39.0 | 4.12e-01 | 92.5% | 79.2% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 42.0 | 4.26e-01 | 93.8% | 79.7% |
| 1hlbA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 43.0 | 3.52e-01 | 82.5% | 73.2% |
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 42.0 | 4.15e-01 | 97.5% | 73.9% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.56 | 45.0 | 4.60e-01 | 92.5% | 89.5% |
| 3k53A02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 46.0 | 4.37e-01 | 97.5% | 74.5% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 36.0 | 3.64e-01 | 96.2% | 63.9% |
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.55 | 38.0 | 4.00e-01 | 71.2% | 91.5% |
| 2p35A02 | 1.10.150.290 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 33.0 | 3.45e-01 | 96.2% | 67.1% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 36.0 | 3.56e-01 | 71.2% | 83.0% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 40.0 | 3.69e-01 | 82.5% | 76.6% |
| 3itfA00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 44.0 | 4.00e-01 | 93.8% | 77.5% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.53 | 36.0 | 3.32e-01 | 71.2% | 100.0% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.52 | 36.0 | 3.15e-01 | 71.2% | 58.8% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 35.0 | 2.54e-01 | 71.2% | 30.5% |
| 1n00A01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.51 | 31.0 | 3.10e-01 | 90.0% | 58.3% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.51 | 38.0 | 3.63e-01 | 81.2% | 81.4% |
| 2ot4A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 43.0 | 3.92e-01 | 93.8% | 72.9% |
| 3gmfA02 | 1.10.40.110 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › | 0.50 | 40.0 | 3.77e-01 | 95.0% | 70.9% |
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.50 | 43.0 | 4.07e-01 | 97.5% | 80.6% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.50 | 39.0 | 3.86e-01 | 83.7% | 90.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2139067 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.63 | 50.0 | 5.32e-01 | 90.0% | 100.0% |
| 4155521 | 518.1.1.0 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.63 | 49.0 | 5.20e-01 | 93.8% | 98.6% |
| 4323518 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.63 | 44.0 | 4.96e-01 | 83.7% | 100.0% |
| 4510097 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.62 | 51.0 | 5.22e-01 | 93.8% | 94.7% |
| 4006721 | 325.1.7.50 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PF25876 | 0.60 | 38.0 | 3.74e-01 | 71.2% | 60.0% |
| 3799630 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.60 | 46.0 | 3.32e-01 | 92.5% | 27.9% |
| 51200 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.58 | 43.0 | 3.63e-01 | 81.2% | 81.6% |
| 3260744 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.55 | 47.0 | 3.13e-01 | 98.8% | 63.7% |
| 3698449 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.53 | 47.0 | 3.26e-01 | 100.0% | 39.6% |
| 3965957 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.53 | 36.0 | 3.78e-01 | 71.2% | 88.0% |
| 3973899 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.53 | 36.0 | 3.00e-01 | 71.2% | 85.5% |
| 3387896 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 36.0 | 3.78e-01 | 98.8% | 84.3% |
| 3386973 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.51 | 35.0 | 3.42e-01 | 71.2% | 81.1% |
| 3971026 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.51 | 35.0 | 3.00e-01 | 70.0% | 97.6% |
| 5083949 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.51 | 35.0 | 3.04e-01 | 71.2% | 45.4% |
| 3941960 | 5086.1.1.86 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG | 0.51 | 35.0 | 3.08e-01 | 71.2% | 47.2% |
| 4010479 | 325.1.7.48 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PF25885 | 0.51 | 35.0 | 3.02e-01 | 71.2% | 45.4% |
| 3964187 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.51 | 34.0 | 3.50e-01 | 70.0% | 96.2% |
| 3948872 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.51 | 35.0 | 2.97e-01 | 71.2% | 45.4% |
| 3969814 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.51 | 35.0 | 3.58e-01 | 71.2% | 78.7% |
| 4362754 | 5086.1.1.86 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG | 0.50 | 34.0 | 3.05e-01 | 71.2% | 49.2% |
| 4927627 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.50 | 43.0 | 3.94e-01 | 97.5% | 72.4% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.50 | 34.0 | 2.76e-01 | 70.0% | 36.9% |