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MG752970.1__AVH85229.1__RsoM2USA_301__00301
Bact-VirMG752970.1__AVH85229.1__RsoM2USA_301__00301
Identity
- Accession:
- MG752970 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 118-187
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.62 | 43.0 | 3.88e-01 | 72.9% | 52.0% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 3.91e-01 | 78.6% | 52.4% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 43.0 | 3.93e-01 | 77.1% | 57.6% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 49.0 | 3.80e-01 | 92.9% | 87.1% |
| 3q9vA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.64e-01 | 72.9% | 88.8% |
| 1kgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.79e-01 | 77.1% | 94.9% |
| 3zq7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 43.0 | 3.87e-01 | 80.0% | 88.1% |
| 2p2sA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 44.0 | 3.17e-01 | 82.9% | 75.5% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 48.0 | 4.38e-01 | 100.0% | 84.8% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 41.0 | 3.47e-01 | 81.4% | 81.1% |
| 6udkD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 3.76e-01 | 92.9% | 75.4% |
| 2v1lA00 | 3.10.450.430 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF2787 | 0.55 | 48.0 | 3.99e-01 | 100.0% | 62.0% |
| 6njeA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.54 | 46.0 | 3.00e-01 | 94.3% | 35.7% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.54 | 46.0 | 2.94e-01 | 94.3% | 35.1% |
| 7mxdX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.72e-01 | 92.9% | 78.2% |
| 1h30A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 3.21e-01 | 94.3% | 86.1% |
| 1kxqE00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.58e-01 | 92.9% | 94.2% |
| 1cpyA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.82e-01 | 94.3% | 85.4% |
| 5a2fA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.67e-01 | 92.9% | 96.2% |
| 3gygC01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 44.0 | 3.26e-01 | 100.0% | 66.5% |
| 2y8nB01 | 2.20.70.100 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 29.0 | 3.37e-01 | 90.0% | 92.9% |
| 3lhhA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.50 | 36.0 | 3.24e-01 | 91.4% | 51.4% |
| 4ddpA00 | 1.10.418.40 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 | 0.50 | 41.0 | 3.14e-01 | 97.1% | 89.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3879372 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.70 | 44.0 | 4.36e-01 | 70.0% | 60.0% |
| 3606756 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.66 | 43.0 | 4.59e-01 | 72.9% | 76.7% |
| 4067273 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.65 | 58.0 | 4.40e-01 | 100.0% | 47.3% |
| 3969535 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 45.0 | 3.84e-01 | 77.1% | 90.9% |
| 4089343 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.61 | 45.0 | 3.82e-01 | 78.6% | 88.7% |
| 3614726 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.61 | 42.0 | 3.49e-01 | 71.4% | 74.2% |
| 119272 | 3152.1.1.1 ↗ | a+b two layers › Hypothetical Protein Vc0508 › Hypothetical Protein Vc0508 › Hypothetical Protein Vc0508 › DUF2787 | 0.60 | 50.0 | 3.94e-01 | 90.0% | 80.4% |
| 3786106 | 4357.1.1.3 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_2 | 0.59 | 47.0 | 4.13e-01 | 87.1% | 67.6% |
| 1780243 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.56 | 51.0 | 3.45e-01 | 100.0% | 62.3% |
| 3255441 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.56 | 43.0 | 3.58e-01 | 85.7% | 79.1% |
| 3538687 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 48.0 | 4.25e-01 | 100.0% | 80.0% |
| 4291975 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.55 | 47.0 | 2.91e-01 | 94.3% | 27.2% |
| 3376270 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.55 | 39.0 | 3.91e-01 | 82.9% | 73.3% |
| 3593620 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.54 | 40.0 | 3.02e-01 | 80.0% | 66.7% |
| 1507759 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.54 | 42.0 | 3.48e-01 | 85.7% | 73.1% |
| 3974816 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.54 | 39.0 | 2.80e-01 | 77.1% | 80.0% |
| 3600800 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 2.87e-01 | 91.4% | 46.4% |
| 4062840 | 3523.1.1.2 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N | 0.53 | 44.0 | 3.28e-01 | 94.3% | 88.4% |
| 3615052 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.53 | 45.0 | 2.71e-01 | 95.7% | 21.7% |
| 3505752 | 363.1.1.1 ↗ | few secondary structure elements › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin_1 | 0.53 | 36.0 | 3.55e-01 | 71.4% | 66.7% |
| 3620000 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 37.0 | 3.17e-01 | 75.7% | 80.8% |
| 3895715 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.95e-01 | 92.9% | 92.2% |
| 3172120 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.52 | 45.0 | 2.84e-01 | 97.1% | 28.5% |
| 4028083 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.52 | 45.0 | 2.79e-01 | 95.7% | 30.6% |
| 3799622 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 37.0 | 2.84e-01 | 75.7% | 70.1% |
| 3477558 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.52 | 43.0 | 3.35e-01 | 100.0% | 92.4% |
| 4177976 | 2487.1.1.3 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Aconitase_C | 0.52 | 38.0 | 3.19e-01 | 77.1% | 83.5% |
| 3239717 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.52 | 43.0 | 3.17e-01 | 98.6% | 46.0% |
| 3896401 | 363.1.1.1 ↗ | few secondary structure elements › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin_1 | 0.51 | 34.0 | 3.43e-01 | 72.9% | 66.7% |