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MG752970.1__AVH85333.1__RsoM2USA_405__00405

Bact-Vir

MG752970.1__AVH85333.1__RsoM2USA_405__00405

Identity

Accession:
MG752970 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 134-245
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dvwA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 39.0 3.78e-01 72.3% 60.6%
2vixA02 1.10.150.630 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 31.0 3.38e-01 91.1% 73.0%
3un6A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 38.0 3.29e-01 81.2% 78.6%
3vxcA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 38.0 3.22e-01 80.4% 77.1%
3gdeA01 1.10.3260.10 Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain 0.51 44.0 3.58e-01 97.3% 54.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4170393 314.1.1.9 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.53 45.0 3.33e-01 100.0% 69.0%
D2 medium residues 14-75_98-125_256-291
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g65B02 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.50 31.0 3.45e-01 80.2% 80.4%