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MG752970.1__AVH85386.1__RsoM2USA_458__00458
Bact-VirMG752970.1__AVH85386.1__RsoM2USA_458__00458
Identity
- Accession:
- MG752970 ↗
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Cluster
View cluster (66 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-137
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_56344_prodigal-single.1__X__X__00048__D3-131
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7t2sA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.86 | 77.0 | 6.90e-01 | 100.0% | 70.3% |
| 2p1jA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.86 | 71.0 | 7.06e-01 | 100.0% | 83.3% |
| 1j54A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.84 | 75.0 | 6.73e-01 | 100.0% | 71.3% |
| 2qxfA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.83 | 76.0 | 6.58e-01 | 100.0% | 66.7% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.82 | 78.0 | 6.63e-01 | 100.0% | 66.7% |
| 1j9aA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.80 | 74.0 | 6.49e-01 | 100.0% | 69.6% |
| 1y97A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.80 | 76.0 | 6.44e-01 | 100.0% | 68.0% |
| 2d5rA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.76 | 70.0 | 5.60e-01 | 100.0% | 63.9% |
| 2xriA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.74 | 68.0 | 5.82e-01 | 100.0% | 63.4% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.74 | 64.0 | 6.00e-01 | 100.0% | 75.6% |
| 5dk5A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.74 | 68.0 | 5.89e-01 | 100.0% | 66.8% |
| 4qozB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 67.0 | 5.61e-01 | 100.0% | 59.9% |
| 7wrnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 67.0 | 5.81e-01 | 100.0% | 67.7% |
| 1uocB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.71 | 66.0 | 5.24e-01 | 100.0% | 59.4% |
| 1noyB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 59.0 | 4.90e-01 | 100.0% | 69.9% |
| 3r2uA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.62 | 35.0 | 4.19e-01 | 100.0% | 84.5% |
| 3iayA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 55.0 | 4.69e-01 | 100.0% | 70.0% |
| 2gv9A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.60 | 55.0 | 4.59e-01 | 100.0% | 69.2% |
| 2k0zA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 34.0 | 3.66e-01 | 100.0% | 65.5% |
| 4hkqA04 | 3.10.20.370 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 34.0 | 4.25e-01 | 82.6% | 96.1% |
| 1urhA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.51 | 37.0 | 3.89e-01 | 100.0% | 86.1% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2888739 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.86 | 77.0 | 6.86e-01 | 100.0% | 69.5% |
| 3945113 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.85 | 74.0 | 6.52e-01 | 100.0% | 66.1% |
| 4381276 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.84 | 80.0 | 6.53e-01 | 100.0% | 59.8% |
| 4044396 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.84 | 80.0 | 6.73e-01 | 100.0% | 65.4% |
| 5062283 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.83 | 72.0 | 6.12e-01 | 100.0% | 58.8% |
| 4299237 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.83 | 79.0 | 6.60e-01 | 100.0% | 64.3% |
| 3941572 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.83 | 77.0 | 5.54e-01 | 100.0% | 38.9% |
| 1501363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 77.0 | 5.08e-01 | 100.0% | 27.6% |
| 3615656 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.82 | 79.0 | 6.50e-01 | 100.0% | 61.4% |
| 5081840 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.82 | 70.0 | 5.91e-01 | 100.0% | 56.7% |
| 4044377 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 76.0 | 5.03e-01 | 100.0% | 27.4% |
| 4672299 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.81 | 73.0 | 6.31e-01 | 100.0% | 64.4% |
| 5052601 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.81 | 68.0 | 5.96e-01 | 100.0% | 61.4% |
| 3682884 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.81 | 72.0 | 5.86e-01 | 100.0% | 54.2% |
| 3740318 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.81 | 75.0 | 6.59e-01 | 100.0% | 69.7% |
| 3008755 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.80 | 74.0 | 6.42e-01 | 100.0% | 66.8% |
| 3822649 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.80 | 70.0 | 5.87e-01 | 100.0% | 58.4% |
| 3923319 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.78 | 73.0 | 5.95e-01 | 100.0% | 57.9% |
| 3969855 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.78 | 72.0 | 6.41e-01 | 100.0% | 71.7% |
| 3738098 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.78 | 72.0 | 5.97e-01 | 100.0% | 68.4% |
| 4541477 | 2484.1.1.65 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Maelstrom | 0.77 | 72.0 | 5.83e-01 | 100.0% | 55.4% |
| 3733253 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.77 | 72.0 | 5.72e-01 | 100.0% | 54.0% |
| 3600799 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 70.0 | 5.86e-01 | 100.0% | 61.8% |
| 3481587 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 69.0 | 5.67e-01 | 100.0% | 63.8% |
| 3711482 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.75 | 70.0 | 5.75e-01 | 100.0% | 62.2% |
| 3608286 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 69.0 | 5.55e-01 | 100.0% | 70.2% |
| 3279532 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 66.0 | 5.78e-01 | 100.0% | 65.8% |
| 3392123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 63.0 | 5.35e-01 | 100.0% | 56.7% |
| 3520911 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 69.0 | 6.61e-01 | 100.0% | 94.7% |
| 3528742 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 69.0 | 5.76e-01 | 100.0% | 62.3% |
| 185107 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 68.0 | 5.19e-01 | 100.0% | 44.9% |
| 4227733 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 68.0 | 5.60e-01 | 100.0% | 63.9% |
| 3229086 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 68.0 | 5.10e-01 | 100.0% | 42.9% |
| 3489491 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 68.0 | 5.49e-01 | 100.0% | 55.9% |
| 4505558 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.73 | 68.0 | 5.82e-01 | 100.0% | 65.4% |
| 3473937 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.73 | 68.0 | 5.76e-01 | 100.0% | 66.2% |
| 3549895 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.73 | 68.0 | 5.62e-01 | 100.0% | 59.1% |
| 3555211 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 68.0 | 5.78e-01 | 100.0% | 65.4% |
| 3993235 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.72 | 67.0 | 5.63e-01 | 100.0% | 65.1% |
| 3378450 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.72 | 67.0 | 5.47e-01 | 100.0% | 57.0% |
| 3506947 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.72 | 65.0 | 5.63e-01 | 100.0% | 65.4% |
| 3613256 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.71 | 65.0 | 5.14e-01 | 100.0% | 50.6% |
| 3600366 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 65.0 | 5.17e-01 | 100.0% | 51.9% |
| 4943877 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 55.0 | 4.89e-01 | 100.0% | 59.5% |
| 3932596 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.65 | 60.0 | 4.90e-01 | 100.0% | 62.6% |
| 3206356 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.61 | 56.0 | 3.93e-01 | 100.0% | 40.7% |
| 5000651 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 55.0 | 3.92e-01 | 100.0% | 40.5% |
| None | — | 0.60 | 56.0 | 3.51e-01 | 100.0% | 23.3% | |
| 4022366 | 2484.1.1.161 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 56.0 | 3.51e-01 | 100.0% | 23.3% |
| 3368695 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 56.0 | 3.91e-01 | 100.0% | 38.2% |
| None | — | 0.60 | 55.0 | 3.98e-01 | 100.0% | 41.4% | |
| 3168836 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 55.0 | 4.41e-01 | 100.0% | 62.7% |
| 3684974 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 55.0 | 3.48e-01 | 100.0% | 24.7% |
| 4023334 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 55.0 | 4.29e-01 | 100.0% | 58.2% |
| 3558197 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 55.0 | 4.46e-01 | 100.0% | 60.8% |
| 3628202 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 55.0 | 3.47e-01 | 100.0% | 22.7% |
| None | — | 0.60 | 55.0 | 3.48e-01 | 100.0% | 23.6% | |
| 5041103 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 45.0 | 4.75e-01 | 100.0% | 90.0% |
| 5019480 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.56 | 52.0 | 3.22e-01 | 100.0% | 19.2% |
| 3610072 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 4.30e-01 | 96.2% | 93.3% |
| 3172939 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 3.57e-01 | 100.0% | 54.4% |
| 4629102 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.55 | 50.0 | 3.38e-01 | 100.0% | 28.3% |
| 3207467 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.51 | 46.0 | 4.39e-01 | 100.0% | 92.3% |
| 4209651 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.51 | 38.0 | 4.07e-01 | 100.0% | 90.4% |
| 3970041 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.50 | 28.0 | 3.00e-01 | 71.2% | 61.7% |
| 5040708 | 2484.1.1.107 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 | 0.50 | 37.0 | 3.50e-01 | 100.0% | 63.0% |
D2
high
residues 145-191
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n2oA03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 58.0 | 4.51e-01 | 74.5% | 39.6% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 53.0 | 4.95e-01 | 72.3% | 69.0% |
| 4ymhD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 51.0 | 3.21e-01 | 97.9% | 14.5% |
| 2vyrA00 | 1.10.245.10 | Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain | 0.73 | 55.0 | 4.46e-01 | 83.0% | 44.7% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.72 | 51.0 | 5.19e-01 | 74.5% | 82.2% |
| 3v42A02 | 1.10.10.1730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Folliculin | 0.71 | 59.0 | 4.89e-01 | 100.0% | 53.2% |
| 1a7wA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.71 | 56.0 | 4.91e-01 | 91.5% | 58.8% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.71 | 57.0 | 4.72e-01 | 91.5% | 100.0% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.68 | 48.0 | 3.39e-01 | 74.5% | 25.2% |
| 3obfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.67 | 60.0 | 4.03e-01 | 100.0% | 83.5% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.66 | 53.0 | 3.54e-01 | 89.4% | 38.2% |
| 1m3sB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.66 | 58.0 | 3.87e-01 | 100.0% | 70.5% |
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.64 | 44.0 | 4.50e-01 | 74.5% | 82.6% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.60 | 50.0 | 3.44e-01 | 95.7% | 26.3% |
| 1jb0K00 | 1.20.860.20 | Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre | 0.58 | 50.0 | 5.07e-01 | 97.9% | 100.0% |
| 4bzaA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.55 | 42.0 | 3.60e-01 | 85.1% | 92.4% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 40.0 | 2.70e-01 | 89.4% | 19.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3707811 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 63.0 | 3.73e-01 | 91.5% | 13.1% |
| 3557910 | 105.1.1.92 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › PF27044 | 0.75 | 61.0 | 4.54e-01 | 89.4% | 36.5% |
| 5079472 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 64.0 | 3.92e-01 | 97.9% | 17.5% |
| 3538928 | 4.1.1.358 ↗ | beta barrels › SH3 › SH3 › SH3 › PLU-1 | 0.73 | 50.0 | 3.56e-01 | 72.3% | 27.1% |
| 3388513 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.71 | 52.0 | 5.12e-01 | 85.1% | 76.0% |
| None | — | 0.70 | 51.0 | 3.31e-01 | 76.6% | 55.4% | |
| 7521 | 323.1.1.6 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf | 0.70 | 53.0 | 3.13e-01 | 97.9% | 10.2% |
| 3506035 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.68 | 59.0 | 4.25e-01 | 100.0% | 34.6% |
| 3298325 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.66 | 51.0 | 5.20e-01 | 93.6% | 91.1% |
| 5077770 | 2500.1.1.3 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › PFL-like | 0.65 | 56.0 | 3.16e-01 | 95.7% | 65.9% |
| 3929695 | 3340.1.1.0 ↗ | extended segments › Helical region in REST corepressor 1 › Helical region in REST corepressor 1 › Helical region in REST corepressor 1 | 0.65 | 46.0 | 4.32e-01 | 76.6% | 80.0% |
| 3271238 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.64 | 50.0 | 3.42e-01 | 100.0% | 22.7% |
| 3487094 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 54.0 | 3.96e-01 | 97.9% | 51.1% |
| 3610944 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 52.0 | 4.02e-01 | 91.5% | 72.1% |
| 3463135 | 3782.1.1.0 ↗ | a+b duplicates or obligate multimers › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related | 0.61 | 54.0 | 4.88e-01 | 100.0% | 72.3% |
| 3833252 | 4106.1.1.0 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack | 0.61 | 55.0 | 3.80e-01 | 100.0% | 32.4% |