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MG752970.1__AVH85402.1__RsoM2USA_475__00475
Bact-VirMG752970.1__AVH85402.1__RsoM2USA_475__00475
Identity
- Accession:
- MG752970 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-58
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6e6qA00 | 1.10.10.1100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BFD-like [2Fe-2S]-binding domain | 0.76 | 63.0 | 6.33e-01 | 100.0% | 98.2% |
| 2rhfA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.74 | 56.0 | 5.14e-01 | 100.0% | 63.2% |
| 3safA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.63 | 53.0 | 4.55e-01 | 100.0% | 64.0% |
| 4nlbA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.62 | 51.0 | 4.52e-01 | 100.0% | 69.1% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.61 | 49.0 | 4.45e-01 | 100.0% | 76.4% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 35.0 | 3.63e-01 | 71.9% | 63.0% |
| 5tdeA01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 48.0 | 3.67e-01 | 100.0% | 50.3% |
| 1eg3A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 42.0 | 3.75e-01 | 86.0% | 90.1% |
| 2ii2A01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.56 | 40.0 | 3.83e-01 | 77.2% | 65.2% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 45.0 | 3.65e-01 | 100.0% | 74.6% |
| 1eiaA01 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.55 | 41.0 | 3.34e-01 | 100.0% | 38.3% |
| 4p1wD00 | 1.10.10.2570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 47.0 | 4.56e-01 | 100.0% | 92.4% |
| 3e05B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 41.0 | 2.94e-01 | 89.5% | 26.0% |
| 2ja2A05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 43.0 | 3.79e-01 | 98.2% | 72.4% |
| 1ji0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 3.02e-01 | 100.0% | 25.9% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.51 | 43.0 | 3.54e-01 | 96.5% | 66.1% |
| 6o1wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 39.0 | 2.61e-01 | 87.7% | 30.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4355268 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.86 | 75.0 | 7.43e-01 | 98.2% | 91.7% |
| 3284080 | 101.32.1.0 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin | 0.77 | 66.0 | 5.81e-01 | 96.5% | 68.2% |
| 4933692 | 101.32.1.2 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › SO_alpha_A3 | 0.77 | 66.0 | 5.80e-01 | 98.2% | 68.2% |
| 3687311 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.76 | 65.0 | 6.14e-01 | 100.0% | 80.0% |
| 167777 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.74 | 56.0 | 5.14e-01 | 100.0% | 63.2% |
| 3964828 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.74 | 56.0 | 4.86e-01 | 100.0% | 53.3% |
| 3980946 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.73 | 55.0 | 4.81e-01 | 100.0% | 53.3% |
| 3474508 | 8001.1.1.0 ↗ | alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen | 0.71 | 64.0 | 6.18e-01 | 100.0% | 90.8% |
| 4950717 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.65 | 55.0 | 4.92e-01 | 100.0% | 77.6% |
| 3268181 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.62 | 52.0 | 3.26e-01 | 98.2% | 30.9% |
| 3204650 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.60 | 49.0 | 4.31e-01 | 100.0% | 64.2% |
| 1284697 | 102.1.1.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC | 0.59 | 49.0 | 4.23e-01 | 100.0% | 63.6% |
| 4026520 | 4085.1.1.5 ↗ | alpha arrays › RbcX-like › RbcX-like › RbcX-like › Stevor | 0.58 | 45.0 | 4.25e-01 | 100.0% | 69.3% |
| 3416676 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.57 | 47.0 | 3.60e-01 | 96.5% | 40.0% |
| 5023662 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 43.0 | 3.93e-01 | 100.0% | 76.2% |