←Back to structures
MG765276.1__AUV59815.1__X__00055
Bact-VirMG765276.1__AUV59815.1__X__00055
Identity
- Accession:
- MG765276 ↗
- Kingdom:
- phage
Quality
74.3
mean pLDDT
Taxonomy
TaxID: 2079432
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-128
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 45.0 | 3.73e-01 | 75.5% | 98.8% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 46.0 | 3.72e-01 | 83.0% | 94.1% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 45.0 | 3.69e-01 | 81.9% | 93.9% |
| 3e05B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 47.0 | 3.78e-01 | 87.2% | 93.8% |
| 2yqzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 44.0 | 3.57e-01 | 83.0% | 96.9% |
| 2p35A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 41.0 | 3.42e-01 | 76.6% | 94.8% |
| 1ok8A03 | 3.30.387.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 3 › Viral Envelope Glycoprotein, domain 3 | 0.54 | 31.0 | 3.39e-01 | 100.0% | 65.4% |
| 3mjkA00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.53 | 39.0 | 3.56e-01 | 100.0% | 57.4% |
| 3mjgB00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.53 | 39.0 | 3.86e-01 | 100.0% | 73.3% |
| 4necC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 39.0 | 3.11e-01 | 83.0% | 97.3% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3515741 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 43.0 | 4.35e-01 | 100.0% | 68.4% |
| None | — | 0.62 | 47.0 | 3.79e-01 | 83.0% | 91.8% | |
| None | — | 0.61 | 47.0 | 3.78e-01 | 81.9% | 94.6% | |
| None | — | 0.61 | 46.0 | 3.76e-01 | 81.9% | 94.6% | |
| 4336917 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.61 | 46.0 | 3.67e-01 | 81.9% | 90.3% |
| 4986411 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.60 | 46.0 | 3.69e-01 | 83.0% | 86.4% |
| 9346 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.60 | 46.0 | 3.71e-01 | 83.0% | 93.5% |
| 3191166 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.59 | 46.0 | 3.39e-01 | 83.0% | 92.2% |
| None | — | 0.59 | 45.0 | 3.68e-01 | 83.0% | 93.5% | |
| 347023 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.59 | 46.0 | 3.76e-01 | 87.2% | 93.2% |
| 3967659 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.58 | 45.0 | 3.68e-01 | 87.2% | 91.3% |
| 4027772 | 213.1.1.10 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Leu_Phe_trans | 0.57 | 46.0 | 3.31e-01 | 87.2% | 35.0% |
| 4021580 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 43.0 | 3.07e-01 | 84.0% | 77.4% |
| 3693820 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.56 | 41.0 | 3.50e-01 | 77.7% | 94.2% |
| 4940944 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 35.0 | 3.19e-01 | 100.0% | 47.2% |
| 4013676 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 3.96e-01 | 100.0% | 64.2% |
| 5022277 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 35.0 | 3.21e-01 | 100.0% | 47.7% |
| 4971398 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 36.0 | 3.43e-01 | 100.0% | 57.3% |
| 4945568 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 38.0 | 3.26e-01 | 100.0% | 46.2% |
| 3525910 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.54 | 43.0 | 4.08e-01 | 100.0% | 72.7% |
| 5030500 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 35.0 | 3.12e-01 | 100.0% | 45.0% |
| 4538250 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 35.0 | 3.13e-01 | 100.0% | 45.9% |
| 1140448 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.53 | 40.0 | 3.14e-01 | 83.0% | 97.3% |
| 3634551 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.53 | 40.0 | 2.99e-01 | 81.9% | 95.4% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 38.0 | 3.45e-01 | 98.9% | 56.8% |
| None | — | 0.52 | 40.0 | 2.87e-01 | 84.0% | 80.8% | |
| 5001277 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.52 | 39.0 | 3.01e-01 | 79.8% | 94.1% |
| 2426534 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.52 | 38.0 | 3.45e-01 | 77.7% | 86.8% |
| 3852199 | 385.1.1.5 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › PDGF | 0.52 | 38.0 | 3.78e-01 | 100.0% | 74.0% |
| 3612803 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.50 | 45.0 | 3.88e-01 | 100.0% | 94.0% |