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MG770897.1__AUV59639.1__SHSt15644_orf00001__00001
Bact-VirMG770897.1__AUV59639.1__SHSt15644_orf00001__00001
Identity
- Accession:
- MG770897 ↗
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Taxonomy
TaxID: 2066503
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-57
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05119.18 best | Terminase_4 | 27.3 | 5.80e-06 | 100.0% | 46.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.68 | 44.0 | 3.18e-01 | 78.4% | 24.3% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.63 | 39.0 | 3.49e-01 | 82.4% | 43.7% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.57 | 39.0 | 3.68e-01 | 72.5% | 69.7% |
| 3chxA02 | 1.10.287.710 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 44.0 | 3.68e-01 | 90.2% | 50.5% |
| 3ewiB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 39.0 | 2.74e-01 | 72.5% | 93.7% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.56 | 41.0 | 2.93e-01 | 74.5% | 93.9% |
| 2yfvC00 | 6.10.250.2010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 45.0 | 4.31e-01 | 92.2% | 75.0% |
| 1v4gA01 | 6.10.140.800 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 38.0 | 3.49e-01 | 80.4% | 56.5% |
| 3ztvA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 36.0 | 2.17e-01 | 70.6% | 88.5% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 36.0 | 2.44e-01 | 70.6% | 27.3% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.51 | 43.0 | 3.10e-01 | 92.2% | 46.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 145432 | 170.2.1.2 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › Gag_p30 | 0.79 | 43.0 | 3.08e-01 | 70.6% | 21.2% |
| 3199044 | 5001.1.1.88 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › STE2 | 0.69 | 51.0 | 3.20e-01 | 80.4% | 35.7% |
| 3403813 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.63 | 52.0 | 3.12e-01 | 100.0% | 13.0% |
| 3723740 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 45.0 | 2.91e-01 | 78.4% | 16.0% |
| 4380798 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.60 | 44.0 | 2.62e-01 | 78.4% | 12.0% |
| 3787064 | 7534.1.1.0 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase | 0.59 | 52.0 | 3.23e-01 | 100.0% | 86.2% |
| 4033043 | 616.1.1.41 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Terminase_4 | 0.59 | 45.0 | 3.83e-01 | 86.3% | 48.9% |
| 3364027 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.57 | 50.0 | 3.33e-01 | 100.0% | 55.8% |
| 3379132 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.56 | 49.0 | 2.99e-01 | 100.0% | 46.3% |
| 4967811 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.56 | 34.0 | 3.27e-01 | 84.3% | 48.3% |
| 5064344 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.56 | 46.0 | 3.25e-01 | 92.2% | 60.6% |
| 3220832 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.55 | 40.0 | 3.33e-01 | 78.4% | 44.4% |
| 3540156 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 45.0 | 2.82e-01 | 100.0% | 67.9% |
| 4500868 | 3255.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › FHIPEP | 0.50 | 36.0 | 2.91e-01 | 78.4% | 38.1% |