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MG775042.2__AUV59368.1__CrRp3_cds10__00010
Bact-VirMG775042.2__AUV59368.1__CrRp3_cds10__00010
Identity
- Accession:
- MG775042 ↗
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autosignataviridae›
Rodentiumvirus›
Citrobacter_phage_vB_CroP_CrRp3
TaxID: 2079275
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-141_246-289
Domain cluster:
rep: NC_054655.1__YP_010054568.1__KGG70_gp77__00003__D1-82_188-234
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ruwA01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.84 | 78.0 | 6.06e-01 | 97.2% | 97.6% |
| 3tebB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.78 | 71.0 | 5.67e-01 | 95.2% | 100.0% |
| 3g6sA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.77 | 72.0 | 5.74e-01 | 97.2% | 100.0% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.75 | 70.0 | 5.66e-01 | 97.2% | 98.4% |
| 4fpvB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.75 | 70.0 | 5.65e-01 | 98.6% | 98.4% |
| 2j63A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.74 | 70.0 | 5.19e-01 | 99.3% | 89.5% |
| 1vybA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.73 | 68.0 | 5.68e-01 | 97.9% | 100.0% |
| 1akoA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.73 | 66.0 | 5.25e-01 | 94.5% | 100.0% |
| 1zwxA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.73 | 66.0 | 5.20e-01 | 96.6% | 100.0% |
| 2jc4A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.73 | 65.0 | 5.29e-01 | 94.5% | 100.0% |
| 6lpmA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.72 | 67.0 | 5.46e-01 | 97.2% | 100.0% |
| 4jg3A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.72 | 67.0 | 5.39e-01 | 97.9% | 98.9% |
| 7n3yC01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.72 | 65.0 | 4.72e-01 | 95.2% | 94.0% |
| 2xswB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.66 | 60.0 | 4.61e-01 | 100.0% | 88.0% |
| 3n9vB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.65 | 61.0 | 4.72e-01 | 97.9% | 97.9% |
| 1wduB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.65 | 58.0 | 5.01e-01 | 95.2% | 99.1% |
| 2ei9A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.62 | 57.0 | 4.96e-01 | 97.2% | 100.0% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 27.0 | 3.70e-01 | 99.3% | 79.5% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.60 | 22.0 | 3.49e-01 | 97.2% | 95.7% |
| 5t89X05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 28.0 | 3.18e-01 | 97.2% | 61.8% |
| 5jtfB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 37.0 | 3.52e-01 | 82.1% | 55.4% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 24.0 | 3.09e-01 | 100.0% | 68.8% |
| 3igrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 34.0 | 3.21e-01 | 91.7% | 49.7% |
| 1vzyA01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.52 | 42.0 | 3.65e-01 | 88.3% | 97.0% |
| 1qhwA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 44.0 | 3.50e-01 | 92.4% | 98.3% |
| 2dnzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 32.0 | 3.73e-01 | 96.6% | 92.5% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 39.0 | 3.54e-01 | 80.7% | 98.5% |
| 3g88A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 3.43e-01 | 84.1% | 72.8% |
| 4c97A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.62e-01 | 70.3% | 97.8% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 38.0 | 3.51e-01 | 97.9% | 60.8% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1487354 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.84 | 78.0 | 6.11e-01 | 97.2% | 100.0% |
| 3967570 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.83 | 77.0 | 5.73e-01 | 97.9% | 93.1% |
| 3903935 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.80 | 73.0 | 5.53e-01 | 97.2% | 91.6% |
| 4505590 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.78 | 73.0 | 5.40e-01 | 97.9% | 92.8% |
| 3587138 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.78 | 70.0 | 5.53e-01 | 94.5% | 100.0% |
| 3989721 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.78 | 70.0 | 5.56e-01 | 94.5% | 100.0% |
| 3797564 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.78 | 72.0 | 5.24e-01 | 97.9% | 96.2% |
| 3615248 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.78 | 74.0 | 5.31e-01 | 100.0% | 95.4% |
| 3527820 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.77 | 71.0 | 5.35e-01 | 97.2% | 86.6% |
| 139349 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.77 | 72.0 | 5.65e-01 | 97.9% | 99.3% |
| 4025140 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.77 | 70.0 | 5.18e-01 | 95.9% | 99.1% |
| 3930634 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.75 | 70.0 | 5.63e-01 | 97.9% | 97.7% |
| 3512868 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.75 | 70.0 | 4.94e-01 | 97.9% | 93.3% |
| 3175131 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.75 | 70.0 | 5.01e-01 | 97.9% | 92.3% |
| 3601780 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.75 | 70.0 | 5.30e-01 | 98.6% | 99.4% |
| 3507800 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.75 | 69.0 | 5.06e-01 | 97.2% | 99.7% |
| 3288516 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.75 | 67.0 | 5.30e-01 | 93.8% | 100.0% |
| 4029776 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.74 | 68.0 | 4.99e-01 | 97.2% | 98.6% |
| 4929629 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.74 | 66.0 | 5.25e-01 | 93.8% | 100.0% |
| 3606118 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.74 | 67.0 | 4.83e-01 | 95.2% | 94.3% |
| 169720 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.74 | 67.0 | 5.41e-01 | 95.2% | 100.0% |
| 5052494 | 246.3.1.10 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos_PGAP2IP | 0.74 | 68.0 | 5.74e-01 | 97.2% | 99.6% |
| 3670087 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.73 | 66.0 | 4.82e-01 | 95.9% | 94.2% |
| 3204052 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.72 | 65.0 | 4.69e-01 | 95.9% | 88.3% |
| 3915066 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.71 | 66.0 | 5.41e-01 | 97.9% | 97.2% |
| 2966525 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.71 | 67.0 | 4.82e-01 | 99.3% | 93.3% |
| 3739338 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.71 | 64.0 | 4.78e-01 | 95.2% | 94.3% |
| 3584172 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.70 | 64.0 | 5.23e-01 | 97.2% | 95.7% |
| 3608887 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.70 | 65.0 | 5.27e-01 | 98.6% | 100.0% |
| 3228266 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.69 | 64.0 | 5.33e-01 | 98.6% | 97.5% |
| 3870015 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.67 | 62.0 | 4.61e-01 | 97.9% | 92.8% |
| 3874027 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.66 | 62.0 | 4.64e-01 | 97.9% | 97.5% |
| 4245977 | 929.1.1.0 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin | 0.64 | 29.0 | 4.13e-01 | 97.9% | 91.2% |
| 5071523 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.57 | 36.0 | 3.50e-01 | 93.8% | 55.2% |
| 4311222 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.55 | 38.0 | 3.39e-01 | 98.6% | 49.3% |
| 5034849 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 45.0 | 3.65e-01 | 97.2% | 94.1% |
| 4482107 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.51 | 41.0 | 3.29e-01 | 86.9% | 98.3% |
| 3687709 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.50 | 41.0 | 3.59e-01 | 88.3% | 90.2% |
| 4169255 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.50 | 40.0 | 3.45e-01 | 86.2% | 74.5% |
D2
medium
residues 142-245
Domain cluster:
rep: NC_054655.1__YP_010054568.1__KGG70_gp77__00003__D83-187