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MG775259.1__AUV61795.1__PsPhBjorn_gp21__00049

Bact-Vir

MG775259.1__AUV61795.1__PsPhBjorn_gp21__00049

Identity

Accession:
MG775259 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-70
PDB
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.77 70.0 5.15e-01 100.0% 62.1%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 4.81e-01 93.1% 42.9%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.63e-01 91.4% 75.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 6.30e-01 98.3% 96.6%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.42e-01 100.0% 78.3%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 4.47e-01 98.3% 43.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 53.0 4.97e-01 84.5% 83.3%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.69 61.0 5.04e-01 100.0% 76.5%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 46.0 4.20e-01 72.4% 90.1%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.41e-01 98.3% 89.0%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 55.0 3.52e-01 98.3% 31.2%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.64 49.0 3.13e-01 84.5% 30.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 5.05e-01 93.1% 83.1%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.87e-01 94.8% 84.0%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.63 47.0 3.07e-01 82.8% 30.9%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 43.0 4.14e-01 72.4% 79.4%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 42.0 3.81e-01 70.7% 78.3%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.63 48.0 3.09e-01 84.5% 31.0%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.62 53.0 3.84e-01 98.3% 51.7%
4kc5C03 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.62 46.0 2.98e-01 82.8% 35.6%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 46.0 3.00e-01 82.8% 29.0%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 51.0 3.16e-01 98.3% 30.8%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 49.0 3.14e-01 94.8% 32.5%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.61 51.0 4.33e-01 100.0% 58.7%
1n7vA01 2.105.10.10 Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller 0.61 48.0 3.54e-01 93.1% 48.6%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 51.0 3.24e-01 100.0% 26.7%
1u4dA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 41.0 3.70e-01 72.4% 85.5%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 46.0 2.96e-01 84.5% 29.9%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 2.98e-01 100.0% 22.5%
1yguA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 45.0 2.93e-01 84.5% 29.7%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 44.0 2.86e-01 84.5% 28.7%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.58 48.0 4.25e-01 100.0% 92.6%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 43.0 2.86e-01 84.5% 31.3%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 47.0 3.85e-01 94.8% 85.1%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.56 46.0 3.86e-01 100.0% 87.9%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.62e-01 100.0% 51.4%
5je6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.13e-01 94.8% 38.6%
4blqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 43.0 2.89e-01 87.9% 62.2%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 46.0 2.82e-01 98.3% 33.2%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 3.70e-01 98.3% 88.7%
3v98A03 3.10.450.60 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.55e-01 86.2% 76.7%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.72e-01 93.1% 35.5%
1e4eB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 46.0 3.52e-01 100.0% 65.4%
4nyqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.55e-01 100.0% 57.5%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.56 44.0 3.62e-01 100.0% 53.8%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.45e-01 100.0% 64.6%
3k5iA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 44.0 3.23e-01 100.0% 41.4%
7bvaA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 43.0 2.91e-01 87.9% 34.5%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 2.97e-01 100.0% 24.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 42.0 2.87e-01 93.1% 46.6%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.54 44.0 3.19e-01 98.3% 34.5%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.36e-01 96.6% 95.9%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 3.52e-01 98.3% 86.9%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.53 43.0 3.57e-01 98.3% 51.2%
1auvA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 43.0 3.68e-01 96.6% 58.1%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 38.0 3.76e-01 82.8% 80.3%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.80e-01 100.0% 22.2%
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.51 40.0 2.73e-01 98.3% 20.8%
2iecD00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.51 38.0 3.27e-01 91.4% 59.8%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.51 42.0 3.84e-01 96.6% 75.3%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 40.0 2.64e-01 94.8% 27.1%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.50 38.0 4.00e-01 89.7% 100.0%
2vtfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.47e-01 93.1% 57.1%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3259841 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 68.0 6.37e-01 84.5% 91.4%
3174977 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.83 66.0 5.51e-01 91.4% 51.6%
3230533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 60.0 6.66e-01 100.0% 97.8%
3214131 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 66.0 5.90e-01 93.1% 63.7%
3302166 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.80 68.0 6.59e-01 93.1% 87.7%
3185321 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.79 67.0 6.11e-01 93.1% 86.7%
5052257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 59.0 5.90e-01 86.2% 78.3%
4022025 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.78 66.0 4.89e-01 93.1% 44.8%
5043697 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 62.0 5.99e-01 86.2% 78.5%
3824699 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.78 66.0 6.38e-01 93.1% 87.7%
3630782 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.76 65.0 4.79e-01 93.1% 45.5%
3812766 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 65.0 6.15e-01 94.8% 95.7%
4002655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.01e-01 100.0% 63.6%
3511007 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.75 66.0 5.08e-01 94.8% 51.7%
3707346 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.81e-01 98.3% 95.2%
647 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 64.0 4.81e-01 93.1% 42.9%
3768116 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 64.0 4.24e-01 93.1% 26.5%
3553413 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 64.0 5.55e-01 93.1% 67.1%
4120629 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 67.0 6.13e-01 100.0% 81.3%
3290564 4.1.1.292 beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.73 64.0 5.57e-01 98.3% 87.8%
3555838 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.73 67.0 5.69e-01 100.0% 81.1%
3710561 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 60.0 5.79e-01 89.7% 96.9%
3932647 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 63.0 5.50e-01 94.8% 71.8%
3484700 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.72 65.0 5.35e-01 98.3% 62.0%
3394789 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 4.83e-01 93.1% 58.2%
4002985 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 61.0 6.06e-01 93.1% 93.3%
5021635 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.71 63.0 4.65e-01 100.0% 39.0%
4023006 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.70 59.0 3.70e-01 94.8% 48.0%
3918299 4.1.1.376 beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.70 61.0 5.78e-01 100.0% 90.0%
4523548 4.8.1.35 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.69 57.0 5.05e-01 91.4% 80.0%
4358168 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 62.0 4.98e-01 100.0% 69.1%
4021395 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 54.0 3.34e-01 86.2% 23.7%
3232582 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 4.89e-01 94.8% 65.3%
5065184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.97e-01 79.3% 91.1%
4405469 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.67 56.0 4.74e-01 93.1% 73.7%
3235791 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.66 51.0 3.26e-01 84.5% 27.8%
3584992 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.66 51.0 3.41e-01 84.5% 39.1%
3901130 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.66 51.0 3.20e-01 84.5% 26.0%
3238942 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.66 51.0 3.20e-01 84.5% 24.8%
3994608 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.66 51.0 3.44e-01 84.5% 37.2%
3234660 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.65 50.0 3.31e-01 84.5% 31.6%
3961894 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.65 47.0 3.74e-01 77.6% 45.0%
None 0.65 50.0 3.19e-01 84.5% 26.8%
3228872 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.65 50.0 3.11e-01 84.5% 23.6%
3882821 2007.2.3.21 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.65 50.0 3.18e-01 84.5% 31.8%
3853555 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 50.0 3.12e-01 84.5% 30.5%
3584918 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 50.0 3.21e-01 84.5% 32.0%
3237464 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 49.0 3.11e-01 84.5% 25.4%
3214110 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 49.0 3.06e-01 84.5% 29.6%
3720660 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.93e-01 94.8% 84.0%
3934999 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.64 49.0 3.12e-01 84.5% 29.3%
3492557 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.64 55.0 4.61e-01 96.6% 57.0%
3409719 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.63 49.0 3.08e-01 84.5% 27.2%
4055974 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.63 52.0 4.10e-01 93.1% 61.6%
591 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.63 52.0 4.85e-01 94.8% 82.9%
3924718 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.63 49.0 3.10e-01 84.5% 26.0%
None 0.63 48.0 3.03e-01 82.8% 26.9%
2803903 2007.2.3.21 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.63 47.0 3.06e-01 82.8% 29.4%
4003008 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.63 48.0 3.12e-01 84.5% 29.0%
3633533 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 54.0 3.38e-01 98.3% 31.0%
3732787 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 53.0 3.27e-01 96.6% 24.3%
3494972 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.62 51.0 3.24e-01 93.1% 31.3%
3617638 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 43.0 3.62e-01 74.1% 53.3%
3699353 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.62 47.0 2.96e-01 84.5% 25.2%
3603190 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 52.0 2.97e-01 98.3% 12.2%
3930110 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 46.0 2.96e-01 84.5% 29.0%
3510577 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.61 45.0 2.90e-01 82.8% 27.3%
5016827 5090.1.1.11 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N 0.59 46.0 3.73e-01 87.9% 66.4%
4998774 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 47.0 2.81e-01 89.7% 83.9%
3609520 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 43.0 3.73e-01 81.0% 68.4%
3933016 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.58 48.0 3.12e-01 98.3% 31.2%
3891004 243.3.1.1 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.57 47.0 4.11e-01 96.6% 80.0%
3981045 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 48.0 3.60e-01 98.3% 51.6%
3397960 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 42.0 2.79e-01 82.8% 28.4%
4563304 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.55 45.0 2.81e-01 91.4% 22.9%
4312097 295.1.1.15 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 0.55 42.0 3.12e-01 89.7% 85.1%
3968320 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.54 43.0 2.87e-01 91.4% 26.3%
168845 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.53 40.0 2.63e-01 84.5% 46.1%
4008120 5.1.5.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.53 44.0 3.61e-01 100.0% 92.5%
4978136 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 45.0 2.54e-01 100.0% 86.5%
4302852 331.22.1.2 a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.52 37.0 2.71e-01 94.8% 24.9%
3609111 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.12e-01 93.1% 51.3%
3294325 331.3.1.40 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 0.51 40.0 3.43e-01 94.8% 74.5%
5056886 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.51 42.0 2.97e-01 98.3% 42.4%
3278725 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 39.0 2.53e-01 91.4% 37.0%
3256856 247.1.1.9 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL 0.50 37.0 2.63e-01 86.2% 32.4%
D2 medium residues 74-137
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4q05A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 42.0 2.70e-01 76.6% 27.5%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.57 44.0 3.58e-01 85.9% 48.4%
3sokB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.56 38.0 3.00e-01 70.3% 64.1%
1p1hB01 3.30.2360.10 Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain 0.53 44.0 3.30e-01 95.3% 91.5%
1lyvA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 41.0 2.72e-01 90.6% 73.9%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 34.0 3.09e-01 98.4% 49.5%
3dbaA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.50 39.0 3.04e-01 92.2% 84.2%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081728 3172.1.1.0 a+b two layers › Uncharacterized protein gp49 › Uncharacterized protein gp49 › Uncharacterized protein gp49 0.60 51.0 5.12e-01 93.8% 100.0%
3678022 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.58 46.0 3.36e-01 89.1% 42.6%
3682758 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.57 41.0 3.77e-01 79.7% 88.9%
3198929 331.4.1.3 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor 0.56 44.0 3.54e-01 90.6% 84.1%
4272986 274.1.1.1 a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin 0.55 37.0 2.99e-01 71.9% 70.7%
3391461 3308.2.1.1 beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › XAC2610 protein › XAC2610 protein › 4_1_CTD 0.55 39.0 3.72e-01 75.0% 80.0%
3170205 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.55 46.0 3.49e-01 98.4% 37.1%
4890602 1.1.8.1 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.53 41.0 4.24e-01 93.8% 93.3%
4030398 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.53 44.0 4.42e-01 95.3% 100.0%
3636195 2003.1.5.26 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 0.52 39.0 2.39e-01 81.2% 75.3%
4596141 288.1.1.3 a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1 0.52 42.0 2.93e-01 100.0% 44.0%
3967619 244.3.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › TSCPD 0.52 39.0 3.37e-01 89.1% 87.5%
4012024 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.52 35.0 2.41e-01 73.4% 44.3%
D3 medium residues 138-199
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 42.0 3.66e-01 77.4% 67.3%
6qv3A05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.34e-01 96.8% 94.6%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.76e-01 98.4% 89.9%
3l9rA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.56 49.0 3.57e-01 100.0% 45.1%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.57e-01 95.2% 84.0%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 4.51e-01 100.0% 84.7%
1m5q102 3.30.310.60 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Like-Sm ribonucleoprotein, C-terminal domain 0.55 38.0 3.96e-01 98.4% 82.8%
3j7aY00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 3.57e-01 100.0% 65.6%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.35e-01 95.2% 84.9%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.51e-01 96.8% 100.0%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.54 43.0 3.59e-01 85.5% 74.8%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.88e-01 98.4% 77.7%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 4.20e-01 96.8% 89.0%
5w3gA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.78e-01 100.0% 78.2%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.90e-01 96.8% 82.6%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 37.0 3.63e-01 79.0% 73.9%
2fokB01 3.90.241.10 Alpha Beta › Alpha-Beta Complex › FokI Restriction Endonuclease; Chain A, domain 1 › Foki Restriction Endonuclease, Chain A, domain 1 0.51 41.0 2.85e-01 100.0% 39.9%
1p91B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 2.92e-01 98.4% 47.3%
3s6xA01 6.20.10.20 Special › Other non-globular › Laminin › 0.51 28.0 2.74e-01 95.2% 44.9%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953655 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.65 44.0 4.43e-01 71.0% 75.4%
4028694 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.64 44.0 4.36e-01 72.6% 75.4%
3928353 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.62 48.0 5.08e-01 85.5% 98.2%
3555844 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.62 53.0 5.12e-01 96.8% 97.1%
3608461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 5.02e-01 91.9% 87.7%
3602755 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.60 47.0 4.51e-01 95.2% 76.0%
4972696 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.92e-01 95.2% 92.1%
3609675 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.17e-01 98.4% 59.1%
3618543 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 34.0 2.96e-01 83.9% 37.9%
3613617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 4.64e-01 98.4% 100.0%
4932736 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.58 45.0 4.28e-01 93.5% 73.3%
4338928 233.1.1.6 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.57 48.0 4.31e-01 96.8% 67.8%
None 0.57 48.0 4.06e-01 98.4% 82.7%
3652823 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.43e-01 96.8% 85.0%
3786628 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.57 48.0 4.45e-01 96.8% 83.7%
3739430 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.27e-01 96.8% 81.1%
3722993 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 3.90e-01 100.0% 66.2%
3099741 101.1.2.47 alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.56 47.0 4.11e-01 96.8% 74.7%
5079289 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.11e-01 100.0% 59.0%
5009770 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.56 47.0 4.44e-01 100.0% 90.0%
4031639 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.56 48.0 4.26e-01 96.8% 72.2%
3342374 101.1.2.69 alpha arrays › HTH › HTH › winged helix domain › La 0.56 48.0 4.13e-01 98.4% 95.0%
3397297 101.1.2.507 alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 0.55 45.0 3.45e-01 90.3% 89.7%
3478717 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.55 46.0 3.84e-01 96.8% 77.4%
3687784 101.1.2.132 alpha arrays › HTH › HTH › winged helix domain › DUF3591 0.55 46.0 4.30e-01 98.4% 77.5%
4294304 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.54 46.0 3.67e-01 100.0% 49.6%
4024491 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.54 45.0 3.86e-01 98.4% 80.0%
3237702 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 3.92e-01 100.0% 67.1%
5061613 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 4.00e-01 95.2% 85.9%
1166576 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.53 45.0 3.86e-01 100.0% 74.8%
3252019 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 4.06e-01 98.4% 78.8%
4241417 219.1.1.21 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.52 41.0 2.83e-01 90.3% 44.7%
3702650 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.51 43.0 3.85e-01 98.4% 76.6%
4987556 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 38.0 3.54e-01 90.3% 62.2%