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MG835450.1__AUV61415.1__phiPsal1_006__00006
Bact-VirMG835450.1__AUV61415.1__phiPsal1_006__00006
Identity
- Accession:
- MG835450 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 126-240
Domain cluster:
rep: KF147891.1__QKE11213.1__PaBG_00148__00148__D7-109
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 43.0 | 5.25e-01 | 99.1% | 97.3% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.61 | 36.0 | 3.96e-01 | 80.0% | 70.5% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.60 | 39.0 | 3.36e-01 | 93.9% | 40.4% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.57 | 32.0 | 3.30e-01 | 95.7% | 56.4% |
| 4iu9B02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 49.0 | 4.03e-01 | 93.9% | 90.1% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.56 | 44.0 | 3.55e-01 | 84.3% | 70.5% |
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 49.0 | 4.05e-01 | 100.0% | 91.4% |
| 3u4qA02 | 1.10.274.50 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.56 | 42.0 | 3.89e-01 | 98.3% | 61.3% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 31.0 | 3.79e-01 | 80.0% | 89.9% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 47.0 | 4.34e-01 | 95.7% | 71.3% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 49.0 | 4.36e-01 | 100.0% | 69.6% |
| 6xm1A02 | 3.90.830.10 | Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a | 0.55 | 38.0 | 3.88e-01 | 93.0% | 72.6% |
| 4qndA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 37.0 | 3.99e-01 | 77.4% | 83.5% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 4.33e-01 | 75.7% | 100.0% |
| 5gj7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 49.0 | 4.48e-01 | 100.0% | 96.7% |
| 1egdA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 46.0 | 4.37e-01 | 96.5% | 95.7% |
| 7odhL01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.54 | 45.0 | 2.89e-01 | 89.6% | 76.3% |
| 5iduC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 47.0 | 4.30e-01 | 100.0% | 92.5% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 42.0 | 3.83e-01 | 92.2% | 61.5% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 34.0 | 3.95e-01 | 74.8% | 98.6% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 46.0 | 4.20e-01 | 99.1% | 85.8% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 41.0 | 4.45e-01 | 93.0% | 99.0% |
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.52 | 37.0 | 3.79e-01 | 85.2% | 77.7% |
| 6m20C01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 44.0 | 3.05e-01 | 100.0% | 40.7% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 39.0 | 4.38e-01 | 100.0% | 100.0% |
| 8sbeA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 46.0 | 3.91e-01 | 100.0% | 88.3% |
| 3mzvA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 42.0 | 3.09e-01 | 88.7% | 48.5% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.50 | 43.0 | 4.29e-01 | 94.8% | 90.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4319295 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.67 | 36.0 | 3.78e-01 | 100.0% | 56.2% |
| 3866648 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.62 | 56.0 | 5.00e-01 | 99.1% | 88.1% |
| 3248680 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 49.0 | 4.99e-01 | 95.7% | 90.0% |
| 3192478 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 55.0 | 4.45e-01 | 100.0% | 79.1% |
| 3175356 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.60 | 43.0 | 3.78e-01 | 75.7% | 98.9% |
| 4226297 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.58 | 34.0 | 3.33e-01 | 93.9% | 52.0% |
| 3368549 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.57 | 51.0 | 4.18e-01 | 100.0% | 70.5% |
| 3593895 | 633.11.1.0 ↗ | alpha bundles › Bromodomain-like › Nqo1C-terminal domain-like › Nqo1C-terminal domain-like | 0.57 | 46.0 | 4.75e-01 | 97.4% | 96.2% |
| 3710592 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.57 | 39.0 | 4.17e-01 | 95.7% | 84.2% |
| 5030139 | 633.22.1.1 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › VKOR | 0.57 | 45.0 | 4.29e-01 | 87.0% | 97.1% |
| 3164482 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 48.0 | 4.04e-01 | 94.8% | 87.2% |
| 4870707 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.56 | 46.0 | 3.70e-01 | 88.7% | 94.4% |
| 4192211 | 192.29.1.159 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › ATG2_CAD | 0.56 | 46.0 | 4.54e-01 | 99.1% | 83.3% |
| 4033422 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 49.0 | 4.18e-01 | 99.1% | 89.9% |
| 3291171 | 3813.1.1.2 ↗ | alpha bundles › DUF416 › DUF416 › DUF416 › Imm5_like | 0.56 | 40.0 | 3.60e-01 | 86.1% | 51.2% |
| 3676738 | 6158.1.1.0 ↗ | alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region | 0.56 | 36.0 | 3.46e-01 | 100.0% | 56.9% |
| 4182983 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.55 | 44.0 | 4.58e-01 | 99.1% | 88.2% |
| 4026469 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 50.0 | 3.97e-01 | 100.0% | 85.1% |
| 2878134 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.55 | 44.0 | 4.17e-01 | 86.1% | 76.4% |
| 3239812 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.55 | 48.0 | 3.82e-01 | 93.9% | 93.3% |
| 3189902 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 47.0 | 3.89e-01 | 97.4% | 88.2% |
| 5075639 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 49.0 | 4.67e-01 | 99.1% | 85.9% |
| 3514684 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 43.0 | 4.31e-01 | 86.1% | 96.5% |
| 3255633 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 45.0 | 3.74e-01 | 100.0% | 89.1% |
| 3760677 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.52 | 40.0 | 2.70e-01 | 97.4% | 21.9% |
| 3819233 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.51 | 35.0 | 3.56e-01 | 72.2% | 70.4% |
| 5012671 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 44.0 | 3.58e-01 | 96.5% | 76.5% |
| 3238614 | 5001.1.1.69 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srd | 0.51 | 44.0 | 3.24e-01 | 96.5% | 64.0% |
| 3223128 | 109.4.1.63 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAP42 | 0.51 | 43.0 | 3.54e-01 | 95.7% | 90.2% |
| 4660205 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.50 | 45.0 | 4.25e-01 | 94.8% | 100.0% |
| 4524127 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.50 | 29.0 | 2.89e-01 | 94.8% | 52.5% |
D2
high
residues 247-388
Domain cluster:
rep: IMGVR_UViG_3300020814_000341-3300020814-Ga0214088_182449110__D102-238
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04586.23 best | Peptidase_S78 | 134.8 | 4.70e-39 | 96.5% | 82.4% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1at3A00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.72 | 58.0 | 4.94e-01 | 90.1% | 54.8% |
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.67 | 57.0 | 4.85e-01 | 90.1% | 61.3% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.66 | 36.0 | 4.61e-01 | 98.6% | 96.0% |
| 1x44A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 37.0 | 4.25e-01 | 99.3% | 79.6% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 35.0 | 3.74e-01 | 75.4% | 62.4% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 35.0 | 4.07e-01 | 76.1% | 79.4% |
| 5yjlB01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.60 | 34.0 | 3.29e-01 | 71.1% | 48.4% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.59 | 32.0 | 3.86e-01 | 73.9% | 79.8% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 40.0 | 4.20e-01 | 91.5% | 77.6% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 36.0 | 4.35e-01 | 74.6% | 94.6% |
| 8bxrA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 36.0 | 4.24e-01 | 99.3% | 92.6% |
| 2jllA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 36.0 | 4.21e-01 | 100.0% | 92.6% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 34.0 | 3.95e-01 | 80.3% | 84.5% |
| 2wv3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.25e-01 | 99.3% | 92.0% |
| 3u5eU00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 35.0 | 4.01e-01 | 85.2% | 86.0% |
| 3kg5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 4.20e-01 | 99.3% | 92.2% |
| 3lcyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 4.11e-01 | 99.3% | 92.8% |
| 2wp3T00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 4.02e-01 | 99.3% | 88.9% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 37.0 | 3.86e-01 | 91.5% | 72.2% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.54 | 28.0 | 3.09e-01 | 99.3% | 59.3% |
| 4fa8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 4.18e-01 | 95.1% | 94.2% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.54 | 31.0 | 3.76e-01 | 91.5% | 86.0% |
| 1ejfA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 37.0 | 4.20e-01 | 77.5% | 90.9% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 32.0 | 3.74e-01 | 84.5% | 84.7% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 28.0 | 3.60e-01 | 71.1% | 100.0% |
| 3gcfA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 39.0 | 3.20e-01 | 78.2% | 73.6% |
| 1n91A00 | 3.30.1200.10 | Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like | 0.50 | 34.0 | 3.80e-01 | 70.4% | 90.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945940 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.95 | 90.0 | 8.97e-01 | 100.0% | 95.2% |
| 3980142 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.94 | 92.0 | 8.97e-01 | 100.0% | 98.7% |
| 4032431 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.93 | 86.0 | 8.35e-01 | 95.8% | 90.3% |
| 3954964 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.87 | 76.0 | 7.62e-01 | 91.5% | 89.0% |
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.87 | 83.0 | 8.24e-01 | 99.3% | 98.6% |
| 4995675 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.80 | 75.0 | 7.10e-01 | 100.0% | 95.2% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.74 | 62.0 | 6.29e-01 | 88.7% | 91.4% |
| 3999603 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 33.0 | 3.79e-01 | 91.5% | 72.0% |
| 4280384 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.61 | 34.0 | 3.28e-01 | 71.1% | 47.3% |
| 184476 | 304.9.1.32 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Ret2_MD | 0.60 | 32.0 | 3.82e-01 | 72.5% | 76.3% |
| 4993996 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.60 | 34.0 | 3.25e-01 | 71.1% | 47.5% |
| 3599334 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 32.0 | 3.70e-01 | 72.5% | 71.0% |
| 1291622 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.59 | 34.0 | 3.29e-01 | 71.8% | 49.4% |
| 4517135 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.59 | 35.0 | 3.33e-01 | 70.4% | 47.4% |
| 3238846 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 32.0 | 3.74e-01 | 91.5% | 75.8% |
| 4350351 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.58 | 34.0 | 3.26e-01 | 71.8% | 48.8% |
| 3701059 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 33.0 | 3.87e-01 | 92.3% | 80.0% |
| 4587782 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.57 | 31.0 | 3.11e-01 | 70.4% | 49.0% |
| 3706789 | 3715.1.1.1 ↗ | a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal_L22e | 0.56 | 36.0 | 3.80e-01 | 84.5% | 72.0% |
| 3595281 | 3715.1.1.0 ↗ | a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e | 0.56 | 35.0 | 3.84e-01 | 83.1% | 74.2% |
| 3921303 | 11.1.1.616 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_KY | 0.56 | 40.0 | 4.27e-01 | 100.0% | 86.7% |
| 3188905 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.55 | 37.0 | 3.41e-01 | 87.3% | 52.8% |
| 3620547 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 33.0 | 3.63e-01 | 94.4% | 73.6% |
| 3531801 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 35.0 | 4.10e-01 | 90.1% | 94.7% |
| 3490226 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 32.0 | 3.92e-01 | 95.1% | 95.3% |
| 5078176 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.53 | 28.0 | 3.59e-01 | 88.7% | 92.0% |
| 3249789 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 4.29e-01 | 97.9% | 90.0% |
| 5069267 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.53 | 30.0 | 3.92e-01 | 81.0% | 100.0% |
| 3478310 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 38.0 | 4.22e-01 | 99.3% | 97.3% |
| 3909864 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 38.0 | 3.86e-01 | 99.3% | 76.4% |
| 5035989 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 30.0 | 3.63e-01 | 91.5% | 86.7% |
| 3742864 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 28.0 | 3.13e-01 | 70.4% | 63.6% |
| 4465073 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.52 | 33.0 | 3.81e-01 | 70.4% | 87.5% |
| 5939 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.52 | 29.0 | 3.66e-01 | 86.6% | 96.2% |
D3
high
residues 401-447
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u7iA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.80 | 56.0 | 3.58e-01 | 74.5% | 16.1% |
| 4f92B10 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.76 | 65.0 | 4.66e-01 | 100.0% | 52.4% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.71 | 62.0 | 5.07e-01 | 100.0% | 60.7% |
| 1vpwA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 49.0 | 4.64e-01 | 89.4% | 64.9% |
| 5dnyA03 | 6.10.10.50 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Mre11, C-terminal domain-like | 0.68 | 49.0 | 4.96e-01 | 78.7% | 80.4% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 43.0 | 3.90e-01 | 74.5% | 49.2% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 53.0 | 4.48e-01 | 100.0% | 77.1% |
| 6n8eA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.62 | 51.0 | 3.24e-01 | 97.9% | 76.2% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.62 | 47.0 | 3.84e-01 | 83.0% | 90.8% |
| 2kwpA00 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.61 | 52.0 | 3.82e-01 | 100.0% | 93.0% |
| 2p6nA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 40.0 | 2.86e-01 | 72.3% | 54.4% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 41.0 | 3.48e-01 | 74.5% | 82.1% |
| 3w3sA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 39.0 | 2.33e-01 | 72.3% | 79.3% |
| 1uxdA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 43.0 | 4.12e-01 | 91.5% | 76.3% |
| 1op1A00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.56 | 46.0 | 3.93e-01 | 95.7% | 79.3% |
| 2cr7A01 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.56 | 46.0 | 4.26e-01 | 95.7% | 90.5% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 43.0 | 3.85e-01 | 87.2% | 76.1% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 42.0 | 3.96e-01 | 89.4% | 71.7% |
| 2x3fA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.54 | 43.0 | 3.58e-01 | 100.0% | 95.0% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 2.84e-01 | 85.1% | 85.2% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.53 | 42.0 | 2.76e-01 | 100.0% | 45.2% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 39.0 | 3.10e-01 | 91.5% | 37.9% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 37.0 | 2.97e-01 | 89.4% | 35.3% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 44.0 | 3.35e-01 | 97.9% | 60.7% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 39.0 | 3.56e-01 | 93.6% | 83.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946473 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 65.0 | 5.08e-01 | 83.0% | 60.0% |
| 4469296 | 3809.1.1.2 ↗ | alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP | 0.80 | 55.0 | 4.77e-01 | 87.2% | 48.6% |
| 4007679 | 192.15.1.109 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Caudo_TAP | 0.80 | 54.0 | 4.65e-01 | 85.1% | 45.9% |
| 3250375 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.76 | 52.0 | 4.46e-01 | 72.3% | 45.3% |
| 3952601 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.76 | 64.0 | 5.67e-01 | 97.9% | 70.0% |
| 3792733 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.73 | 54.0 | 3.43e-01 | 80.9% | 39.1% |
| 3718035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 57.0 | 5.12e-01 | 89.4% | 63.1% |
| 4194552 | 3193.1.1.0 ↗ | alpha arrays › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related | 0.69 | 56.0 | 4.64e-01 | 97.9% | 50.6% |
| 3844040 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 47.0 | 4.26e-01 | 72.3% | 52.3% |
| 3928911 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 48.0 | 4.31e-01 | 78.7% | 57.1% |
| 3638546 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.67 | 59.0 | 3.77e-01 | 100.0% | 64.8% |
| 3796175 | 192.15.1.99 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › PF31025 | 0.66 | 47.0 | 4.58e-01 | 76.6% | 69.8% |
| 3188839 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.65 | 56.0 | 3.55e-01 | 100.0% | 61.2% |
| 3636504 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.64 | 46.0 | 2.87e-01 | 76.6% | 13.0% |
| 5046186 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.64 | 52.0 | 3.69e-01 | 95.7% | 29.1% |
| 4936706 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.64 | 51.0 | 3.24e-01 | 100.0% | 17.5% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 44.0 | 4.25e-01 | 83.0% | 67.3% |
| 4280714 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.61 | 49.0 | 4.77e-01 | 95.7% | 85.5% |
| 3277496 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 49.0 | 3.08e-01 | 100.0% | 23.4% |
| 4990527 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 50.0 | 3.79e-01 | 100.0% | 50.8% |
| 3766229 | 558.1.1.31 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › Synaphin | 0.56 | 40.0 | 3.60e-01 | 76.6% | 54.3% |
| 3791357 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 37.0 | 2.53e-01 | 83.0% | 20.6% |
| 4846601 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.53 | 37.0 | 2.91e-01 | 80.9% | 31.1% |
| 3524358 | 2006.1.4.48 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DC_STAMP | 0.52 | 42.0 | 3.43e-01 | 100.0% | 64.8% |
D4
medium
residues 11-52
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pzxA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.75 | 63.0 | 4.55e-01 | 97.6% | 82.8% |
| 2pmzB05 | 3.90.1070.20 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.70 | 51.0 | 4.19e-01 | 78.6% | 91.3% |
| 2napA03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.68 | 50.0 | 3.15e-01 | 83.3% | 73.1% |
| 2hh2A00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.66 | 52.0 | 4.38e-01 | 90.5% | 97.5% |
| 1afsA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.65 | 49.0 | 2.92e-01 | 83.3% | 35.7% |
| 1ciaA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 50.0 | 3.20e-01 | 88.1% | 29.6% |
| 1q0sA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.62 | 46.0 | 3.59e-01 | 81.0% | 66.3% |
| 4hjhA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.61 | 46.0 | 3.43e-01 | 85.7% | 90.4% |
| 1neeA01 | 3.30.70.3150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 43.0 | 3.38e-01 | 81.0% | 42.9% |
| 3k17A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.58 | 50.0 | 3.22e-01 | 100.0% | 37.7% |
| 2oycA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.58 | 44.0 | 3.27e-01 | 90.5% | 98.4% |
| 4yy8B01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.54 | 38.0 | 3.16e-01 | 76.2% | 76.9% |
| 3c19A02 | 3.10.20.300 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain | 0.53 | 40.0 | 3.52e-01 | 95.2% | 69.2% |
| 3svkA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 42.0 | 2.81e-01 | 100.0% | 61.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972257 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.80 | 61.0 | 6.24e-01 | 83.3% | 90.0% |
| 3250206 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.67 | 57.0 | 4.78e-01 | 100.0% | 66.7% |
| 3890848 | 221.1.1.9 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd,PIK3CG_ABD | 0.65 | 57.0 | 3.45e-01 | 100.0% | 22.1% |
| 4991239 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.62 | 50.0 | 3.83e-01 | 88.1% | 52.6% |
| 3714022 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.60 | 48.0 | 4.33e-01 | 90.5% | 65.0% |
| 3967464 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.58 | 48.0 | 4.29e-01 | 90.5% | 73.3% |
| 3796903 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.51 | 39.0 | 3.12e-01 | 83.3% | 84.7% |
D5
medium
residues 63-107
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b0yA00 | 4.10.490.10 | Few Secondary Structures › Irregular › High-Potential Iron-Sulfur Protein; Chain A › High potential iron-sulphur protein | 0.77 | 65.0 | 5.37e-01 | 100.0% | 67.1% |
| 3h31A00 | 4.10.490.10 | Few Secondary Structures › Irregular › High-Potential Iron-Sulfur Protein; Chain A › High potential iron-sulphur protein | 0.75 | 61.0 | 5.17e-01 | 100.0% | 55.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3537468 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.57 | 37.0 | 3.17e-01 | 80.0% | 40.0% |
| 4249943 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 3.80e-01 | 82.2% | 93.3% |