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MG835450.1__AUV61443.1__phiPsal1_033__00034

Bact-Vir

MG835450.1__AUV61443.1__phiPsal1_033__00034

Identity

Accession:
MG835450 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-54_175-197
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 38.0 2.86e-01 77.9% 61.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5064982 3290.1.1.1 alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › FeoB_Cyto 0.56 34.0 3.44e-01 97.4% 58.7%
D2 medium residues 55-174
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09588.17 best YqaJ 27.5 4.90e-06 72.5% 67.3%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3syyA00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.82 78.0 6.45e-01 100.0% 61.3%
3sm4A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.81 76.0 6.05e-01 100.0% 53.8%
3k93A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.81 75.0 6.02e-01 100.0% 64.1%
4ic1D00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.76 69.0 5.61e-01 100.0% 55.8%
5zyuA01 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.75 70.0 5.76e-01 100.0% 71.1%
3fovA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.66 52.0 5.59e-01 91.7% 100.0%
4oa3A00 3.10.310.50 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.64 41.0 3.95e-01 95.0% 56.0%
2xi5A00 3.40.91.60 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.63 56.0 4.87e-01 96.7% 65.8%
6ll8A02 3.10.310.20 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain 0.61 40.0 4.07e-01 95.8% 66.7%
4hrvA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.60 42.0 4.05e-01 97.5% 62.6%
2oaaB01 3.40.210.20 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › MvaI/BcnI restriction endonuclease, catalytic domain 0.59 38.0 3.95e-01 99.2% 70.4%
1tx3D00 3.40.600.10 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II 0.59 53.0 4.20e-01 99.2% 82.8%
3hw5B00 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.58 50.0 4.42e-01 96.7% 62.8%
2odhA01 3.40.210.20 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › MvaI/BcnI restriction endonuclease, catalytic domain 0.58 40.0 4.02e-01 100.0% 69.1%
8be0A01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.58 51.0 4.40e-01 96.7% 70.2%
6d6zA02 3.40.50.11440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain 0.58 50.0 4.05e-01 94.2% 77.9%
2ezvA01 3.40.600.40 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Type II restriction enzyme SfiI, multifunctional domain 0.58 51.0 4.29e-01 100.0% 57.9%
3ledA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.57 41.0 3.38e-01 95.8% 41.1%
3devA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.57 34.0 3.54e-01 98.3% 62.1%
4hlbA00 3.30.70.2960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 40.0 4.44e-01 74.2% 100.0%
4da2A02 3.40.1350.60 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 47.0 4.42e-01 94.2% 100.0%
3gwaA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.55 41.0 3.66e-01 96.7% 54.5%
3m7vA02 3.30.70.1250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phosphopentomutase 0.54 39.0 3.90e-01 75.0% 95.9%
1atnD00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.51 46.0 3.56e-01 97.5% 56.6%
3w1eA02 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.51 44.0 3.94e-01 96.7% 85.9%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2491448 2008.1.1.50 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.82 78.0 5.26e-01 100.0% 56.7%
136966 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.81 75.0 6.02e-01 100.0% 64.1%
424674 2008.1.1.50 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ 0.80 76.0 5.97e-01 100.0% 52.8%
4942551 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.75 70.0 5.63e-01 100.0% 55.9%
5012863 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.75 70.0 5.85e-01 100.0% 67.2%
4324924 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.73 64.0 5.72e-01 93.3% 83.6%
4010258 2008.1.1.58 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF3799 0.72 67.0 5.09e-01 100.0% 70.9%
4329875 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.72 65.0 6.42e-01 97.5% 98.4%
5056974 2008.1.1.159 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 0.72 67.0 4.75e-01 100.0% 62.4%
4959669 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 66.0 5.17e-01 100.0% 73.8%
4046812 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.71 64.0 5.38e-01 100.0% 60.5%
3262617 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 49.0 5.07e-01 71.7% 100.0%
4555637 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.69 61.0 5.29e-01 100.0% 63.3%
4660186 2008.1.1.159 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 0.68 62.0 4.66e-01 100.0% 64.2%
4999640 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.67 62.0 5.09e-01 100.0% 67.1%
4928680 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 63.0 5.29e-01 100.0% 72.1%
3244616 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.66 60.0 4.33e-01 100.0% 40.4%
5005296 2008.1.1.232 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF25941 0.66 51.0 5.13e-01 98.3% 81.7%
4660505 2008.1.1.186 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_9 0.65 52.0 4.93e-01 95.8% 71.0%
4098518 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.65 60.0 4.16e-01 100.0% 43.4%
3580762 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.65 57.0 4.41e-01 99.2% 44.2%
5073133 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.64 57.0 5.31e-01 95.8% 96.7%
4081795 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.64 60.0 4.22e-01 100.0% 67.7%
3821558 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.64 60.0 4.20e-01 100.0% 63.7%
5079137 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.64 56.0 5.28e-01 93.3% 97.9%
4935732 2008.1.1.165 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_MjaI 0.64 52.0 5.42e-01 90.0% 95.5%
4951680 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.64 55.0 4.77e-01 95.8% 95.3%
3235696 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.63 58.0 4.11e-01 100.0% 39.7%
4998336 2008.1.1.107 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.63 55.0 5.17e-01 94.2% 97.2%
4954341 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.63 58.0 4.71e-01 100.0% 58.1%
4014350 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 58.0 4.10e-01 100.0% 66.4%
3592513 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 56.0 4.05e-01 100.0% 46.4%
4590621 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.62 57.0 4.01e-01 100.0% 42.2%
5061506 2008.1.1.108 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 0.62 52.0 5.38e-01 92.5% 94.8%
5076295 2008.1.1.107 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.61 52.0 5.06e-01 91.7% 99.3%
4950447 2008.1.1.87 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YhcG_C 0.61 53.0 4.85e-01 99.2% 72.7%
3628154 2008.1.1.91 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C 0.61 55.0 4.06e-01 100.0% 37.5%
4956059 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 53.0 4.70e-01 92.5% 70.3%
4991375 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 52.0 5.33e-01 91.7% 97.4%
4321682 3351.1.1.1 a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N 0.61 48.0 4.61e-01 100.0% 72.9%
3617935 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 37.0 3.24e-01 70.8% 42.5%
4968040 2008.1.1.235 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26618 0.60 51.0 4.97e-01 92.5% 97.7%
5074968 2008.1.1.122 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII-MboI 0.60 50.0 4.67e-01 95.8% 73.1%
4030490 2008.1.1.124 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF6831 0.59 47.0 5.00e-01 86.7% 97.1%
4955559 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.59 51.0 5.18e-01 92.5% 93.3%
3578270 2008.1.1.94 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5614 0.59 53.0 4.55e-01 97.5% 71.1%
3415033 2008.1.1.27 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.59 53.0 3.79e-01 100.0% 41.4%
3800850 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.59 53.0 4.57e-01 99.2% 70.5%
3413983 2008.1.1.94 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5614 0.59 53.0 4.55e-01 99.2% 70.5%
3477161 5104.1.1.3 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 0.58 44.0 4.04e-01 95.8% 62.0%
3602814 2008.1.1.210 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27324 0.58 52.0 4.57e-01 100.0% 68.1%
3486967 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.58 44.0 4.03e-01 95.8% 62.0%
3484916 3351.1.1.1 a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N 0.57 46.0 4.49e-01 95.0% 79.2%
4946865 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 45.0 4.75e-01 85.8% 99.1%
3281852 2008.1.1.14 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Vsr 0.56 50.0 4.69e-01 96.7% 84.1%
4935707 7581.1.1.0 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like 0.56 40.0 3.59e-01 95.0% 53.3%
3548841 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.55 48.0 3.66e-01 95.0% 80.7%
5074340 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.55 32.0 3.05e-01 97.5% 48.6%
3933475 213.1.1.6 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.55 39.0 4.04e-01 74.2% 99.1%
4992664 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.55 38.0 3.61e-01 96.7% 59.3%
3385008 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 38.0 3.99e-01 75.8% 92.7%
5075107 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.52 32.0 3.04e-01 96.7% 51.4%
3170444 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.52 43.0 3.69e-01 91.7% 76.5%
4955160 7592.1.1.5 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csx1_CARF 0.52 46.0 3.46e-01 100.0% 62.6%
5070602 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.51 32.0 3.05e-01 96.7% 52.1%
3614860 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.51 45.0 3.44e-01 98.3% 84.8%
3514202 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.51 43.0 3.56e-01 90.8% 74.9%
4931776 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.51 45.0 4.06e-01 100.0% 72.4%
3288021 2008.6.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains 0.50 41.0 3.64e-01 89.2% 87.8%
4880160 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.50 39.0 3.34e-01 88.3% 51.8%