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MG922974.1__AVJ48992.1__X__00083
Bact-VirMG922974.1__AVJ48992.1__X__00083
Identity
- Accession:
- MG922974 ↗
- Kingdom:
- phage
Quality
52.1
mean pLDDT
Taxonomy
TaxID: 2099850
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-90
Domain cluster:
rep: HQ641380.1__ADU79214.1__EcP1_gp63__00063__D18-92
D2
high
residues 615-752
D3
medium
residues 99-226
Domain cluster:
rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00165__D203-306
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pygA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.61 | 56.0 | 3.90e-01 | 99.2% | 33.2% |
| 5olpA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.58 | 53.0 | 3.66e-01 | 100.0% | 43.5% |
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.56 | 53.0 | 3.58e-01 | 100.0% | 32.5% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.55 | 51.0 | 4.16e-01 | 100.0% | 69.9% |
| 2d6fA03 | 3.40.50.40 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 34.0 | 3.39e-01 | 96.1% | 58.7% |
| 1rmgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.54 | 49.0 | 3.38e-01 | 100.0% | 33.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4449643 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.62 | 58.0 | 3.89e-01 | 100.0% | 37.3% |
| 1725727 | 207.2.1.27 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Phage_spike_2 | 0.61 | 58.0 | 3.72e-01 | 100.0% | 27.6% |
| 4855553 | 207.2.1.94 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim | 0.61 | 56.0 | 4.05e-01 | 100.0% | 37.4% |
| 4446517 | 207.2.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix | 0.60 | 57.0 | 3.92e-01 | 100.0% | 34.0% |
| 4355788 | 207.2.1.76 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim, Beta_helix | 0.60 | 55.0 | 3.49e-01 | 98.4% | 28.7% |
| 4527582 | 207.2.1.76 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim, Beta_helix | 0.60 | 56.0 | 3.89e-01 | 100.0% | 34.0% |
| 5082245 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.58 | 52.0 | 3.54e-01 | 100.0% | 37.1% |
| 2139004 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.58 | 53.0 | 3.66e-01 | 100.0% | 43.6% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.58 | 49.0 | 3.25e-01 | 100.0% | 25.1% |
| 4961398 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.57 | 51.0 | 3.36e-01 | 100.0% | 36.2% |
| 2546335 | 207.2.1.32 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › CatAgl_D2 | 0.56 | 53.0 | 3.65e-01 | 100.0% | 36.3% |
| 5018356 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.55 | 50.0 | 3.87e-01 | 100.0% | 57.2% |
| 1546396 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.51 | 35.0 | 3.21e-01 | 78.9% | 53.5% |