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MG941013.1__AVJ50964.1__XHP1_00027__00027

Bact-Vir

MG941013.1__AVJ50964.1__XHP1_00027__00027

Identity

Accession:
MG941013 ↗
Kingdom:
phage

Quality

68.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Actinomyces_phage_xhp1

TaxID: 2099653

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 194-388
PDB
Domain cluster: rep: MH479923.1__AXH46490.1__SEA_ROBINSPARKLES_41__00041__D278-455
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.67 37.0 4.46e-01 70.3% 80.0%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.62 34.0 4.45e-01 74.9% 99.0%
2zahA02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 38.0 4.50e-01 76.9% 94.5%
2nykA02 2.60.40.2530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 26.0 3.76e-01 75.9% 93.1%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 38.0 4.46e-01 81.0% 96.3%
2xdhA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 36.0 4.16e-01 81.0% 91.3%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.55 36.0 4.10e-01 81.0% 87.7%
1f0lA03 2.60.40.700 Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain 0.52 37.0 4.09e-01 81.0% 92.2%
4aq1A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 26.0 3.49e-01 71.3% 95.7%
1rc6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 47.0 4.37e-01 100.0% 80.2%
1sfnA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 46.0 4.30e-01 100.0% 82.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1723245 10.42.1.2 ↗ beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain › Coat_P 0.63 37.0 4.60e-01 76.4% 94.0%
4335239 10.12.1.22 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI 0.61 52.0 4.55e-01 90.3% 81.4%
1885 11.1.5.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin 0.57 38.0 4.46e-01 81.0% 96.3%
5007335 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 36.0 3.94e-01 81.0% 75.8%
3412365 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.53 36.0 4.19e-01 89.7% 97.8%
4002435 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 36.0 3.88e-01 72.3% 84.2%
2647299 10.32.1.52 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH115_C 0.50 38.0 3.96e-01 78.5% 94.6%
D2 medium residues 1-17_70-174
PDB