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MG941013.1__AVJ50980.1__XHP1_00043__00043
Bact-VirMG941013.1__AVJ50980.1__XHP1_00043__00043
Identity
- Accession:
- MG941013 ↗
- Kingdom:
- phage
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-62
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aehA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 52.0 | 4.21e-01 | 100.0% | 41.4% |
| 1evjC02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.71 | 35.0 | 2.48e-01 | 77.0% | 15.5% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 45.0 | 3.97e-01 | 98.4% | 46.2% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.68 | 48.0 | 5.01e-01 | 85.2% | 81.8% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.68 | 52.0 | 4.51e-01 | 85.2% | 70.1% |
| 1v9xA00 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.66 | 55.0 | 4.55e-01 | 95.1% | 84.2% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.65 | 51.0 | 2.97e-01 | 85.2% | 10.2% |
| 2l31A00 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.65 | 54.0 | 4.54e-01 | 96.7% | 54.5% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.64 | 54.0 | 4.74e-01 | 96.7% | 66.7% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.62 | 39.0 | 4.56e-01 | 80.3% | 97.6% |
| 4uy8X00 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.62 | 46.0 | 4.30e-01 | 82.0% | 84.4% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 42.0 | 3.86e-01 | 100.0% | 54.2% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.61 | 50.0 | 3.94e-01 | 100.0% | 44.0% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 36.0 | 3.27e-01 | 85.2% | 43.4% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 38.0 | 3.76e-01 | 96.7% | 63.6% |
| 5f7pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 42.0 | 3.37e-01 | 100.0% | 39.0% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.56 | 40.0 | 3.93e-01 | 80.3% | 88.6% |
| 1u3oA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 41.0 | 4.14e-01 | 83.6% | 85.5% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 46.0 | 3.47e-01 | 100.0% | 57.4% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 42.0 | 3.70e-01 | 98.4% | 93.1% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.51 | 44.0 | 3.37e-01 | 98.4% | 67.8% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 38.0 | 2.60e-01 | 88.5% | 47.3% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 37.0 | 2.62e-01 | 82.0% | 70.9% |
| 1g6zA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 34.0 | 3.35e-01 | 90.2% | 62.9% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.50 | 41.0 | 3.16e-01 | 100.0% | 61.1% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3584076 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.73 | 53.0 | 4.79e-01 | 96.7% | 55.3% |
| 3351761 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.69 | 54.0 | 4.73e-01 | 90.2% | 55.8% |
| 2971782 | 2484.1.1.39 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble | 0.69 | 48.0 | 3.91e-01 | 100.0% | 39.5% |
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 54.0 | 5.59e-01 | 91.8% | 100.0% |
| 4654276 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.68 | 55.0 | 4.60e-01 | 90.2% | 52.4% |
| 3662203 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.67 | 53.0 | 4.86e-01 | 91.8% | 64.7% |
| 158834 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.67 | 57.0 | 4.46e-01 | 96.7% | 45.5% |
| 156826 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.66 | 55.0 | 4.55e-01 | 95.1% | 84.2% |
| 3260561 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.66 | 57.0 | 4.91e-01 | 100.0% | 65.0% |
| 5045085 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.66 | 50.0 | 4.63e-01 | 88.5% | 63.7% |
| 3250863 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.66 | 54.0 | 4.88e-01 | 96.7% | 67.1% |
| 4342292 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.65 | 46.0 | 4.82e-01 | 85.2% | 83.6% |
| 3615649 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 42.0 | 4.46e-01 | 91.8% | 74.5% |
| 3336718 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.65 | 51.0 | 4.67e-01 | 91.8% | 63.5% |
| 3592264 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.65 | 52.0 | 4.30e-01 | 91.8% | 47.8% |
| 3700246 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.65 | 50.0 | 4.16e-01 | 86.9% | 67.0% |
| 3395156 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.65 | 54.0 | 4.51e-01 | 96.7% | 55.7% |
| 4961820 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 45.0 | 4.60e-01 | 75.4% | 83.3% |
| 3990002 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.64 | 53.0 | 4.76e-01 | 91.8% | 65.9% |
| 4934241 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.64 | 52.0 | 4.82e-01 | 91.8% | 73.8% |
| 4028826 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.63 | 52.0 | 4.21e-01 | 91.8% | 48.3% |
| 3611838 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.63 | 42.0 | 2.83e-01 | 100.0% | 16.8% |
| 3623942 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 41.0 | 4.22e-01 | 88.5% | 70.7% |
| 4242930 | 4232.1.1.1 ↗ | few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 | 0.61 | 46.0 | 4.15e-01 | 85.2% | 87.8% |
| 4963192 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.60 | 54.0 | 3.93e-01 | 98.4% | 43.1% |
| 4311788 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.59 | 42.0 | 3.39e-01 | 96.7% | 39.1% |
| 5049822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 41.0 | 4.63e-01 | 73.8% | 100.0% |
| 3280385 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.58 | 37.0 | 3.85e-01 | 96.7% | 70.9% |
| 4515154 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.57 | 40.0 | 3.22e-01 | 96.7% | 39.1% |
| 3500755 | 304.55.1.14 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp | 0.57 | 39.0 | 2.70e-01 | 93.4% | 21.0% |
| 4247937 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 37.0 | 3.11e-01 | 98.4% | 39.1% |
| 4949189 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.55 | 45.0 | 4.34e-01 | 100.0% | 81.2% |
| 3236475 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 46.0 | 3.62e-01 | 100.0% | 75.6% |
| 4358798 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 44.0 | 4.13e-01 | 100.0% | 74.7% |
| 3171938 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.53 | 46.0 | 3.79e-01 | 100.0% | 73.7% |
| 3587662 | 330.18.1.0 ↗ | a+b two layers › dsRBD-like › Anti-CRISPR protein AcrIIA6 › Anti-CRISPR protein AcrIIA6 | 0.52 | 44.0 | 3.94e-01 | 98.4% | 65.6% |
| 3927710 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 45.0 | 3.32e-01 | 100.0% | 64.2% |
| 4976692 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.51 | 41.0 | 2.88e-01 | 98.4% | 82.4% |
| 3929256 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.51 | 45.0 | 3.47e-01 | 100.0% | 73.6% |
| 3266842 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 44.0 | 3.57e-01 | 100.0% | 81.6% |
| 3900401 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.51 | 44.0 | 3.53e-01 | 100.0% | 79.2% |