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MG941013.1__AVJ50990.1__XHP1_00053__00053

Bact-Vir

MG941013.1__AVJ50990.1__XHP1_00053__00053

Identity

Accession:
MG941013 ↗
Kingdom:
phage

Quality

85.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-54_70-147
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.67 46.0 4.32e-01 70.4% 92.4%
3tbiB02 6.10.140.1670 Special › Helix non-globular › Helix Hairpins › 0.67 46.0 4.76e-01 75.0% 76.0%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.66 58.0 5.27e-01 100.0% 96.1%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.66 48.0 4.79e-01 99.1% 73.5%
5dqqA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.65 44.0 4.23e-01 97.2% 58.6%
2b5dX02 1.20.1430.10 Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain 0.65 47.0 4.67e-01 100.0% 71.9%
2gsqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 40.0 4.02e-01 76.9% 61.1%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.64 48.0 4.00e-01 79.6% 63.9%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.64 46.0 4.43e-01 75.0% 99.2%
1ylmA00 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.63 48.0 4.38e-01 79.6% 99.3%
2ozbB01 1.10.287.4070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 43.0 4.06e-01 70.4% 91.6%
2dnxA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 43.0 4.00e-01 74.1% 58.5%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 54.0 4.73e-01 100.0% 65.6%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.61 41.0 3.98e-01 86.1% 60.5%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 42.0 3.73e-01 70.4% 99.4%
4d3zA02 1.10.132.130 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.61 44.0 4.41e-01 75.0% 100.0%
8ex5A02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.61 45.0 3.63e-01 78.7% 67.1%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.61 49.0 4.84e-01 97.2% 80.2%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.60 43.0 3.72e-01 73.1% 71.7%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.60 48.0 4.57e-01 100.0% 72.7%
3crjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 42.0 3.58e-01 73.1% 65.4%
3ezhA00 1.20.120.960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain 0.60 44.0 4.42e-01 78.7% 97.4%
4q5nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 39.0 3.88e-01 80.6% 63.4%
3er9B01 1.20.1270.320 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Poxvirus poly(A) polymerase, N domain 0.59 40.0 4.08e-01 100.0% 71.7%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.58 43.0 3.88e-01 78.7% 100.0%
7kypB01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.58 41.0 3.05e-01 73.1% 36.5%
7m2wE01 1.20.120.1900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain 0.57 50.0 3.67e-01 100.0% 55.2%
5x56B00 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.57 39.0 3.98e-01 71.3% 100.0%
3hd6A00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.56 43.0 2.94e-01 81.5% 68.7%
3qsgA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 35.0 3.44e-01 88.0% 57.4%
2ra1A01 1.20.58.790 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 38.0 4.01e-01 74.1% 79.6%
4gc0A02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.55 41.0 3.24e-01 79.6% 98.2%
6okdA03 1.20.930.40 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Transferrin receptor-like, dimerisation domain 0.54 48.0 4.43e-01 100.0% 83.5%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 39.0 3.28e-01 75.0% 47.4%
3u52D00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.53 46.0 3.30e-01 96.3% 45.4%
3bt5A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 47.0 4.23e-01 99.1% 93.4%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.53 38.0 3.32e-01 75.0% 50.9%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 37.0 3.80e-01 74.1% 75.7%
6s8bA01 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.53 42.0 3.90e-01 88.9% 71.4%
2xheA03 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.52 42.0 4.14e-01 98.1% 79.3%
3rh3A01 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.52 45.0 4.15e-01 91.7% 74.4%
1i36A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.52 31.0 3.26e-01 75.9% 64.6%
3gi7A00 1.20.1270.180 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 40.0 4.09e-01 100.0% 90.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288225 102.1.3.2 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › Adenyl_transf 0.70 51.0 4.77e-01 75.0% 86.9%
3793073 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.69 47.0 4.71e-01 100.0% 69.1%
3800611 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.65 55.0 3.86e-01 92.6% 87.0%
3239294 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.65 55.0 3.81e-01 92.6% 81.4%
3989535 632.6.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit 0.64 46.0 4.88e-01 100.0% 85.3%
3235672 192.29.1.137 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Otopetrin 0.63 47.0 3.81e-01 78.7% 61.0%
3408786 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.63 47.0 3.60e-01 79.6% 53.1%
5079313 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.62 48.0 3.99e-01 83.3% 66.2%
5045258 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.62 47.0 3.96e-01 82.4% 65.6%
5032080 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.62 44.0 4.40e-01 75.0% 94.8%
4653633 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.61 49.0 3.93e-01 86.1% 60.0%
4011365 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.61 46.0 3.60e-01 78.7% 52.8%
3226477 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.61 46.0 3.57e-01 79.6% 50.4%
4946108 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.61 43.0 3.63e-01 74.1% 63.7%
4018342 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.61 41.0 4.13e-01 98.1% 67.3%
3399791 7015.1.1.2 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › XK-related 0.61 53.0 3.85e-01 100.0% 47.6%
3735547 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.60 44.0 3.46e-01 75.0% 59.1%
3429223 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.60 50.0 4.53e-01 100.0% 65.3%
4304195 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.60 43.0 3.33e-01 74.1% 57.2%
3756888 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.60 54.0 4.74e-01 100.0% 70.0%
3294231 5050.1.1.26 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › UVB_sens_prot 0.59 47.0 3.50e-01 84.3% 65.1%
4963714 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.59 44.0 3.71e-01 80.6% 64.0%
4046724 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.59 39.0 3.51e-01 75.0% 49.3%
3776595 4177.1.1.16 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FAP206 0.59 39.0 2.79e-01 74.1% 24.3%
3781416 5069.1.1.25 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Yip1 0.59 49.0 4.05e-01 93.5% 93.1%
3230949 103.4.1.1 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX 0.58 32.0 3.74e-01 88.0% 76.0%
3255243 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.58 43.0 4.19e-01 100.0% 70.0%
3202225 3651.1.1.0 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.58 43.0 3.60e-01 77.8% 71.6%
3513985 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.58 42.0 3.34e-01 75.9% 57.0%
3186503 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.58 42.0 3.34e-01 75.0% 60.0%
3560739 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.58 52.0 3.77e-01 100.0% 87.9%
3500907 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.58 46.0 3.48e-01 86.1% 69.1%
3286362 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.57 41.0 3.42e-01 74.1% 60.0%
3269552 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.57 44.0 3.51e-01 80.6% 63.3%
4949645 5050.1.1.53 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MarC 0.57 42.0 3.45e-01 78.7% 63.8%
4936086 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.56 47.0 3.92e-01 89.8% 62.2%
5047337 171.1.1.4 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 0.56 40.0 3.31e-01 85.2% 40.2%
3188141 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.55 39.0 3.14e-01 75.0% 59.0%
4451131 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.55 38.0 3.44e-01 71.3% 100.0%
3229576 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.55 37.0 4.16e-01 100.0% 93.8%
3725257 109.3.1.148 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Goodbye 0.55 49.0 3.87e-01 100.0% 74.2%
3212145 633.22.1.0 alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) 0.54 49.0 4.05e-01 100.0% 88.4%
4937262 1188.1.1.1 alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip 0.52 44.0 3.58e-01 100.0% 61.3%
3217876 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.52 46.0 3.21e-01 99.1% 63.3%
3647621 633.22.1.0 alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) 0.52 46.0 3.82e-01 100.0% 55.9%
3834034 5067.1.1.13 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ALMT 0.52 39.0 3.45e-01 84.3% 53.3%
3690536 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 42.0 3.30e-01 100.0% 40.9%
3933017 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.51 44.0 4.18e-01 100.0% 79.2%
3964012 3831.1.1.1 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI 0.51 37.0 3.74e-01 100.0% 75.5%
4219465 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.51 42.0 4.21e-01 88.9% 93.6%
3367916 5067.1.1.13 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ALMT 0.51 39.0 3.46e-01 84.3% 56.8%
3577574 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.50 45.0 3.84e-01 100.0% 77.2%
4964964 5076.2.1.3 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF4013 0.50 45.0 3.64e-01 100.0% 91.0%
D2 medium residues 202-260
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12728.14 best HTH_17 27.8 3.50e-06 84.8% 92.2%
PF13411.13 MerR_1 26.3 8.90e-06 84.8% 65.2%
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 59.0 5.00e-01 100.0% 53.5%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 62.0 4.76e-01 100.0% 41.4%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.71 57.0 5.12e-01 100.0% 63.5%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 59.0 5.57e-01 100.0% 79.5%
3dv9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.67 43.0 4.10e-01 94.9% 55.7%
1r6bX03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 54.0 4.74e-01 96.6% 61.4%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.29e-01 79.7% 68.7%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.26e-01 84.7% 61.2%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 3.85e-01 84.7% 55.3%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.94e-01 100.0% 90.5%
2fi1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 40.0 3.92e-01 93.2% 62.5%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 3.88e-01 84.7% 61.0%
4p72A04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.60 50.0 4.70e-01 98.3% 86.8%
3pcoB04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.59 50.0 4.72e-01 98.3% 88.0%
2bl0B01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 46.0 4.48e-01 100.0% 79.4%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.09e-01 96.6% 61.6%
3ogzA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.59 40.0 2.44e-01 72.9% 11.5%
7v7yA01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.59 48.0 3.09e-01 93.2% 82.0%
4wriA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 40.0 2.81e-01 72.9% 49.7%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.99e-01 84.7% 63.9%
1f4qA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 47.0 3.56e-01 100.0% 36.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.16e-01 94.9% 72.2%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.80e-01 84.7% 60.0%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.02e-01 79.7% 30.9%
1aoyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.47e-01 96.6% 73.1%
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.57 39.0 3.80e-01 84.7% 65.6%
2ma3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.84e-01 84.7% 59.1%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.74e-01 79.7% 57.1%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.81e-01 84.7% 68.9%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.93e-01 84.7% 73.3%
3tw6A06 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 37.0 3.82e-01 96.6% 74.1%
3ikhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 46.0 3.06e-01 100.0% 73.1%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.56 45.0 3.14e-01 98.3% 60.5%
2icgA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.55 46.0 3.47e-01 96.6% 54.7%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.55 46.0 4.48e-01 100.0% 95.6%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.44e-01 96.6% 39.6%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.81e-01 84.7% 72.1%
3l4gB01 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.54 45.0 4.06e-01 100.0% 96.6%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.53 45.0 3.80e-01 100.0% 63.9%
2cxiA01 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.53 43.0 4.06e-01 98.3% 91.1%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.90e-01 96.6% 67.5%
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.53 45.0 4.31e-01 100.0% 92.9%
2doaA00 1.10.10.2670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › E3 ubiquitin-protein ligase 0.53 41.0 3.49e-01 89.8% 50.0%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.77e-01 79.7% 77.6%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.82e-01 100.0% 67.7%
2w00A02 3.90.640.50 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.51 44.0 4.12e-01 96.6% 83.6%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.88e-01 100.0% 72.6%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 30.0 2.58e-01 96.6% 37.2%
1gzsB00 1.10.4120.10 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain 0.50 41.0 3.12e-01 98.3% 76.4%
2hf6A00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 41.0 3.20e-01 98.3% 45.0%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.64e-01 98.3% 62.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.19e-01 96.6% 40.0%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604634 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.82 70.0 7.02e-01 98.3% 95.0%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.81 68.0 6.17e-01 98.3% 68.8%
3975516 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 61.0 5.05e-01 96.6% 48.6%
3282088 101.1.9.84 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.77 67.0 5.69e-01 96.6% 62.1%
4034168 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.77 61.0 6.28e-01 100.0% 92.7%
3291218 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 64.0 4.93e-01 100.0% 43.1%
3974460 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.74 62.0 4.78e-01 100.0% 42.3%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 62.0 5.15e-01 100.0% 53.3%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.73 58.0 5.98e-01 100.0% 96.4%
4032500 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 58.0 5.51e-01 100.0% 74.3%
5070666 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 58.0 5.99e-01 100.0% 96.4%
3974607 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 57.0 4.54e-01 100.0% 40.8%
3281073 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 64.0 5.25e-01 100.0% 55.2%
4933561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.72 55.0 5.63e-01 94.9% 90.9%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.71 56.0 5.76e-01 100.0% 96.4%
5000254 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.70 53.0 5.64e-01 94.9% 100.0%
3291502 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 61.0 6.12e-01 98.3% 98.3%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 54.0 5.77e-01 96.6% 100.0%
4096952 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 60.0 4.88e-01 100.0% 51.3%
None 0.69 60.0 5.70e-01 100.0% 82.9%
4954942 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 58.0 5.73e-01 100.0% 93.8%
5074949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 4.36e-01 79.7% 54.4%
5044560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 3.32e-01 79.7% 23.9%
2168161 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.67 53.0 5.40e-01 98.3% 91.2%
4266122 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.67 51.0 4.55e-01 100.0% 55.8%
4031678 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.66 48.0 4.67e-01 78.0% 73.8%
4993073 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.66 48.0 4.18e-01 79.7% 51.1%
4625844 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.65 48.0 4.56e-01 84.7% 67.1%
4026717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 4.56e-01 79.7% 75.7%
4106869 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.65 47.0 4.53e-01 79.7% 68.6%
4188749 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.65 47.0 4.34e-01 79.7% 58.7%
4096180 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.65 47.0 4.74e-01 84.7% 78.3%
4992586 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.64 46.0 4.55e-01 79.7% 73.8%
4608195 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.63 54.0 5.06e-01 98.3% 88.0%
5053119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 3.99e-01 89.8% 53.3%
4989829 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.62 45.0 4.22e-01 79.7% 64.0%
4271327 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.61 53.0 4.76e-01 100.0% 80.0%
4260823 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.61 52.0 4.67e-01 98.3% 78.8%
4093644 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.61 53.0 4.64e-01 100.0% 74.4%
4168215 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.61 52.0 4.75e-01 98.3% 86.3%
4580006 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.61 52.0 4.65e-01 98.3% 81.2%
4073474 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.60 51.0 4.63e-01 98.3% 80.0%
4668511 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.60 51.0 4.59e-01 98.3% 76.5%
4185373 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.60 50.0 4.55e-01 98.3% 80.0%
4457773 2007.5.1.27 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PF27354 0.59 47.0 3.41e-01 91.5% 91.6%
4169295 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.59 50.0 4.44e-01 98.3% 77.8%
3972430 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.59 50.0 4.65e-01 96.6% 94.7%
4055520 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.59 49.0 4.48e-01 98.3% 81.2%
4644238 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.59 50.0 4.48e-01 98.3% 80.0%
3403481 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 48.0 4.43e-01 100.0% 72.9%
5036572 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.58 49.0 4.60e-01 98.3% 89.3%
3384684 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 42.0 3.83e-01 79.7% 74.1%
4973866 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.58 49.0 4.42e-01 98.3% 80.0%
1639050 103.5.1.0 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.58 37.0 4.09e-01 94.9% 88.6%
4626742 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.57 48.0 4.55e-01 98.3% 88.0%
5060154 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 47.0 4.57e-01 100.0% 97.1%
4934922 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 46.0 4.40e-01 98.3% 89.3%
4968961 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 47.0 4.36e-01 98.3% 87.5%
4937464 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 47.0 4.41e-01 98.3% 88.0%
4932335 101.1.9.20 alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 0.56 47.0 4.52e-01 100.0% 97.1%
4947879 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 47.0 4.50e-01 98.3% 95.7%
4945293 101.1.9.153 alpha arrays › HTH › HTH › Putative DNA-binding domain › tRNA_synthFbeta 0.55 46.0 4.18e-01 98.3% 82.4%
3676148 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.55 45.0 3.68e-01 96.6% 56.0%
4941734 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.55 46.0 4.32e-01 98.3% 89.3%
4395667 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.85e-01 96.6% 62.5%
5008984 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.54 45.0 4.01e-01 98.3% 77.8%
3652603 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.54 46.0 3.85e-01 100.0% 55.5%
4964720 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.53 43.0 2.95e-01 96.6% 80.4%
3614506 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 43.0 3.85e-01 96.6% 68.9%
5023102 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.50 44.0 3.65e-01 100.0% 53.6%