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MG962366.1__AVO24968.1__SEA_FINCH_23__00023
Bact-VirMG962366.1__AVO24968.1__SEA_FINCH_23__00023
Identity
- Accession:
- MG962366 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Taxonomy
TaxID: 2094144
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-71
Domain cluster:
rep: NC_019457.1__YP_007003082.1__F353_gp42__00042__D36-90
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 45.0 | 3.66e-01 | 89.7% | 41.3% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 39.0 | 3.52e-01 | 70.6% | 69.8% |
| 4madA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 3.86e-01 | 100.0% | 56.0% |
| 5eo9B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.68e-01 | 100.0% | 61.1% |
| 1v9kA00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.52 | 42.0 | 3.10e-01 | 98.5% | 71.4% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 3.24e-01 | 100.0% | 35.9% |
| 2f4pA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 40.0 | 3.35e-01 | 91.2% | 57.5% |
| 4gqcA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 41.0 | 3.21e-01 | 94.1% | 80.6% |
| 3wisA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.50 | 40.0 | 3.04e-01 | 91.2% | 91.7% |
| 1te5A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.50 | 41.0 | 2.90e-01 | 98.5% | 98.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3890411 | 11.2.1.74 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF28322 | 0.57 | 44.0 | 3.52e-01 | 88.2% | 87.7% |
| 3474603 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 44.0 | 3.65e-01 | 88.2% | 84.4% |
| 2816600 | 304.28.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › NPC1_MLD | 0.54 | 41.0 | 2.94e-01 | 88.2% | 83.0% |
| 3280091 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 45.0 | 3.31e-01 | 97.1% | 52.5% |
| 4033809 | 10.32.1.260 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YfhO | 0.53 | 41.0 | 3.49e-01 | 88.2% | 48.0% |
| 3890598 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 45.0 | 3.59e-01 | 100.0% | 85.8% |
| 3648822 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.07e-01 | 100.0% | 81.0% |
| 4555052 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 44.0 | 3.25e-01 | 98.5% | 58.0% |
| 3800816 | 221.14.1.0 ↗ | a+b two layers › beta-Grasp › TAR DNA-binding protein 43 N-terminal domain › TAR DNA-binding protein 43 N-terminal domain | 0.51 | 34.0 | 3.34e-01 | 70.6% | 67.5% |
| 5037411 | 304.22.1.0 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain | 0.51 | 40.0 | 3.68e-01 | 92.6% | 88.0% |
| 4979124 | 821.1.1.4 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF123 | 0.50 | 41.0 | 3.33e-01 | 98.5% | 92.3% |
| 3892416 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.50 | 37.0 | 3.17e-01 | 80.9% | 75.8% |
| 1145534 | 7564.1.1.1 ↗ | a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein | 0.50 | 40.0 | 3.04e-01 | 91.2% | 91.7% |