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MG962366.1__AVO25005.1__SEA_FINCH_66__00066

Bact-Vir

MG962366.1__AVO25005.1__SEA_FINCH_66__00066

Identity

Accession:
MG962366 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Finchvirus› Rhodococcus_phage_Finch

TaxID: 2094144

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-104
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x62A01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.72 44.0 5.42e-01 82.5% 100.0%
2mbvA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.72 47.0 4.73e-01 86.6% 66.7%
2xjyA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.71 45.0 5.42e-01 82.5% 100.0%
4jcjB01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.70 46.0 5.41e-01 86.6% 100.0%
2d8xA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.70 47.0 5.36e-01 94.8% 95.7%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 31.0 2.30e-01 90.7% 17.3%
2dloA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.68 46.0 5.00e-01 92.8% 84.0%
2xqnT01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.66 42.0 5.00e-01 83.5% 100.0%
4kfzA02 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.64 42.0 4.94e-01 85.6% 100.0%
4hi8B00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.62 40.0 4.52e-01 83.5% 88.9%
2miqA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 32.0 3.32e-01 89.7% 58.5%
2xb1A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.52 41.0 4.21e-01 85.6% 99.0%
1wevA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 31.0 3.66e-01 85.6% 93.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2650943 377.1.1.29 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TtuA_LIM_N 0.74 27.0 4.52e-01 74.2% 100.0%
3404271 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.67 44.0 5.16e-01 78.4% 98.5%
3520173 376.1.2.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM 0.67 38.0 4.85e-01 73.2% 100.0%
3939505 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.66 26.0 3.81e-01 75.3% 85.0%
3903614 375.1.3.2 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › MRNIP 0.57 29.0 3.48e-01 88.7% 73.8%
3880983 376.1.4.4 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › PF26200 0.53 35.0 3.39e-01 71.1% 61.9%
4031948 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.52 44.0 4.18e-01 100.0% 77.4%
4271737 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.51 29.0 3.13e-01 81.4% 63.5%
3697767 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.50 31.0 3.49e-01 94.8% 81.3%