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MG962366.1__AVO25086.1__SEA_FINCH_158__00158

Bact-Vir

MG962366.1__AVO25086.1__SEA_FINCH_158__00158

Identity

Accession:
MG962366 ↗
Kingdom:
phage

Quality

66.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Finchvirus› Rhodococcus_phage_Finch

TaxID: 2094144

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-77
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00138__D6-73
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 46.0 3.57e-01 100.0% 45.1%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 45.0 3.57e-01 100.0% 47.4%
3s24A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 40.0 3.72e-01 88.9% 81.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4014144 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.67 35.0 2.94e-01 100.0% 29.2%
5039467 304.165.1.0 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.58 42.0 3.21e-01 76.4% 95.9%
3930072 281.1.1.1 ↗ a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.54 44.0 3.02e-01 91.7% 35.8%
3340789 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 43.0 2.75e-01 87.5% 97.8%
3274364 560.1.1.0 ↗ few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain 0.53 35.0 4.03e-01 77.8% 100.0%
D2 high residues 105-155
PDB